Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00023 ATGGAGGACAAGGTTCGTGCTGTTATGAAAAAATATCTTCCCTATCAATCTATTTTTGCTAAGCTATCATATGGAGAGAGTCAGATGCTTGACAAGGCATTCTATGAGGAGGAGGTGAAAAAGCTTTGCTTGGCGTTTGAGCAACAGTTTCATTATGCTGTATTCTTCACATATATGAGGTTAAGGGAACAGGAGATCAGGAACTTAATATGGATTTCAGAATGTGTTGCTCAGAATTGGAAGTCCAGAATTCATGACAGTGTTGTCTTCATATATTAG 279 0.3799 MEDKVRAVMKKYLPYQSIFAKLSYGESQMLDKAFYEEEVKKLCLAFEQQFHYAVFFTYMRLREQEIRNLIWISECVAQNWKSRIHDSVVFIY 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00023 92 Pfam ATP synthase (C/AC39) subunit 3 85 IPR002843 GO:0046961
Pumo5g00023 92 SUPERFAMILY V-type ATP synthase subunit C 5 90 IPR036079 -
Pumo5g00023 92 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 3 91 IPR016727 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00023 Pumo-Chr5 1867417 1868487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00023 3 92 Primary Pumps ATPases(2) AT3G28715 83.333 3.34e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00023 K02146 - gmx:100800553 169.859