Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00008 ATGGATGAAGTGCTTTTGGTGTTTCAAAATCAGTACCGCCAGCTACACACAACAAGATCATGGAACTTCATTGGGTTACCTCTGACTGCTAAGAGAAGCTTGAAATTAGAGAGTGGCACAATTGTTGCTCTTTTGGATACAGGGATCACGCCCGAGTCCAAAAGCTTCAAGGACGATGGATTTGGTCCTCCACCAGCAAGATGGAAAGGATCTTGTGGCCACTATGCAAATTTCTCAGGCTGCAATAAGTAA 252 0.4444 MDEVLLVFQNQYRQLHTTRSWNFIGLPLTAKRSLKLESGTIVALLDTGITPESKSFKDDGFGPPPARWKGSCGHYANFSGCNK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00008 83 Gene3D Peptidase S8/S53 domain 17 83 IPR036852 GO:0004252|GO:0006508
Pumo5g00008 83 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 83 IPR045051 -
Pumo5g00008 83 SUPERFAMILY Subtilisin-like 8 58 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00008 Pumo-Chr5 792669 793239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00008 1 82 Subtilisin-like Serine Gene Family AT4G00230 68.293 4.02e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00008 - - gmx:100795950 165.236