Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00005 ATGGCTCAAGGAAGAGGCAGTGTTGCAATATTAATGCTACTTTTTGGTATGCTGGTGTTTTCCTCTGAGATGGTTCATGCTAGAAAAATCTATAAGGTTGGGATTGCAGATGGTTCATGCTTCGCAGACATATGTTGGACCTATAACGTGTCTGATTGGCCTAGGGGAAAGACCTTTCTCCCTGGTGACGTACTTGAATTCAATTACGAAGCTTATTCGCACAACGTGGTGGTTGTGGACGAGGAAGGATACAATTCATGTAAAGCTAGAAAAGATTCAAAAAGGTATGAGACAGGAAAAGATCGGATCCAACTTTCCGAGGGAACAAGTTACTTCATTTGCACTTTTTATCGTCACTGTGAAAAAGGGATGAAAATTGCAGTCACTGCAATTGATGATTGTTCAACGCTTTCTCACTTGTGGCAGCAACATGGCATAGGGCGCAACTCAAGACCTGCCTGGGTGTCTTCTGTAAATTACATGGAGAATGCTCATTGTCATCAAATGCAGGAGGTGCCATCGCTCTGCGCTTTCTCCCATAGTGATCAGCATCTGGCTTAG 561 0.4349 MAQGRGSVAILMLLFGMLVFSSEMVHARKIYKVGIADGSCFADICWTYNVSDWPRGKTFLPGDVLEFNYEAYSHNVVVVDEEGYNSCKARKDSKRYETGKDRIQLSEGTSYFICTFYRHCEKGMKIAVTAIDDCSTLSHLWQQHGIGRNSRPAWVSSVNYMENAHCHQMQEVPSLCAFSHSDQHLA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00005 186 PANTHER BLUE COPPER PROTEIN 31 142 IPR039391 GO:0009055
Pumo5g00005 186 CDD Plantacyanin 42 130 IPR041844 -
Pumo5g00005 186 Gene3D - 41 130 IPR008972 -
Pumo5g00005 186 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Pumo5g00005 186 FunFam basic blue protein-like 30 130 - -
Pumo5g00005 186 SUPERFAMILY Cupredoxins 45 130 IPR008972 -
Pumo5g00005 186 Pfam Plastocyanin-like domain 48 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00005 Pumo-Chr5 603575 606111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00005 8 131 Phytocyanin Superfamily AT1G17800 36.434 3.91e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00005 - - jre:109007045 138.272