Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00004 ATGCCCACCATGGTTAAGAGTTTACAATTTGATTTTGGCCCTAACTCACCACTTTCCATGCCGCTGCAAGAGGTGGTGGCGTTTTCTCAGTACGCTGCTGATAGGAGCAATGTTCTAAAAGCTTTTTCACCAGTGTATATTTCTTGGTATCTAAAAAGAGGAGGTAAAGAAGGTTGGACTTCCCTTGGTGGCATCTTGGTCAACATAACAGGGACAAAGGTTCTTTTTGCTGACCTAGCCCACTTTCCAGTCTCTTCGGTTGAGGATATAATTATAGGAAATTTAGACCGTGTTTTCATTCAAGCAGAAGAAAAACATGAGATTCTGGCTTCAGACAATGATGTTGCTGCAGCTATGGACAATGCAAAGACGATTGGAAAATATGCAAGATTTATTCAAGTTCACTTGTAG 411 0.4112 MPTMVKSLQFDFGPNSPLSMPLQEVVAFSQYAADRSNVLKAFSPVYISWYLKRGGKEGWTSLGGILVNITGTKVLFADLAHFPVSSVEDIIIGNLDRVFIQAEEKHEILASDNDVAAAMDNAKTIGKYARFIQVHL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00004 136 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 33 88 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo5g00004 136 Pfam K+ potassium transporter 34 87 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00004 Pumo-Chr5 575747 578380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00004 36 88 Inorganic Solute Cotransporters AT2G35060 67.925 9.47e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00004 K03549 - tcc:18607037 90.5077