Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo58g00007 ATGAAGGATTTGTTAACGACAGGCATGCATATGAGCAGTAATGCCTTTGCCATTGTAACCGAATTGGCTGACACTGTTAACGATTGGAATGTCACAAAATTACTTGGGCGTCGCCTCCTTCAAGATTCTGAGCTTCCCTCATGGGTTGATCAACGTAGACTCCTTAATGCAAATACAAGTCCATTCAAACACAAGCCTAATGTTATTGTAGCCATAAATGGTAGTGGAGATTTCAAAAGCATCAATGAGGCATTGAAGCAAGTTCCTGAGAAAAATCGAAAGCCATTTGTGATCTACATCAAGGAGGGTGTTTACCAAGAGTATGTTGAAGTTACAAAGGAAATGACCCACGTGGTGTTTATTGGGGAAGGTGGAAGAAAGACACGAATAACCGACAACAAAAACTTCATAGATGGAATTAACACTTACAGAACTGCCACTATTGCTATTCAAGGAGATCATTTTGTGGCCATCAATATGGGGTTTGAAAACTCTGCTGGACCTCAAAAGCATCAAGCAGTGGCATTAAGAGCGCAAGCAGATAAGTCCATCTTCTACAATTGCTCAATGGATGGGTATCAGGATACACTTTATGCACACACCATGCGTCAATTCTATAGGGATTGCACCATTTCAGGTAGAAAAGAGAGACAACAACCATCTGGAATAGTAATCCAAGGGGGATCCATTGTGTCTGACCCTGAGTTCTACTCAGTGAGATTTGAGAACAAAGCTTACCTAGGCCGTCCATGGAAGAATTACTCTAGGACCATCATCATGGACACGTACATTGATGATTTGATTCATGCCGATGGGTATATGCCATGGCAAGGTCTAGAGGGCCCTTCTGGTATGGATACTTGCTTTTATGCCGAGTACCACAACACTGGCCCCGGTTCAGACAAATCTAAGCGTGTTAATTGGGCTGGGATTTGGAACCTCAATTCAAAAGCTGCACATTGGTTCTCACCATCCAAGTTCATTCATGGCACTGACTGGATTAAGGCTATCGGGATTCCTTGCTTCCCTGATGTGCCCACACATCATAAGCACAAAAAGACTATACTTAATTGGTGA 1077 0.4271 MKDLLTTGMHMSSNAFAIVTELADTVNDWNVTKLLGRRLLQDSELPSWVDQRRLLNANTSPFKHKPNVIVAINGSGDFKSINEALKQVPEKNRKPFVIYIKEGVYQEYVEVTKEMTHVVFIGEGGRKTRITDNKNFIDGINTYRTATIAIQGDHFVAINMGFENSAGPQKHQAVALRAQADKSIFYNCSMDGYQDTLYAHTMRQFYRDCTISGRKERQQPSGIVIQGGSIVSDPEFYSVRFENKAYLGRPWKNYSRTIIMDTYIDDLIHADGYMPWQGLEGPSGMDTCFYAEYHNTGPGSDKSKRVNWAGIWNLNSKAAHWFSPSKFIHGTDWIKAIGIPCFPDVPTHHKHKKTILNW 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo58g00007 358 PANTHER PECTINESTERASE 5 214 - -
Pumo58g00007 358 SUPERFAMILY Pectin lyase-like 65 342 IPR011050 -
Pumo58g00007 358 Gene3D - 31 213 IPR012334 -
Pumo58g00007 358 Gene3D - 214 345 IPR012334 -
Pumo58g00007 358 Pfam Pectinesterase 67 213 IPR000070 GO:0030599|GO:0042545
Pumo58g00007 358 ProSitePatterns Pectinesterase signature 1. 92 111 IPR018040 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo58g00007 1 340 Carbohydrate Esterase AT3G05610 46.950 3.67e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo58g00007 K01051 - gmx:100803527 668.307