Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo58g00006 ATGGGGTGCATAACTTCCAAGAATGCAGCTGTTGAAGACAGCAGGGAAGGTGTGACAAGGGAATTGACTTCATCTAGCAAAAGGGCATCGAAGATGAAGGTTTCTGCATCGAATTCGGAGAAAAGGGTTGATGGAGTTAGGAGGAAAGATAAGGTTTTACATGGTGCTGATATGAAAGTTTCATTGATTGACAAGGAATCCAACGGTTCGATGCGGTTGTGTGATGGTCAGAATGGGAAGAAGAAAAAGGAGAAACCTGAATTGGCTATTCTTGATCATCCTGGTCTTGGAAGGGTTCCAAAGGGTTTAGAAGGAGAGCAAGTTGCAGCAGGGTGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCAAGGGTGGATACCGCGAAAGGCGGATACTTTTGAGAGGTTTTATAAAATTGGCCAAGGAACCTACAGTACTGTGTATAAGGCACGTGATTTGACTCACCAAAAGATCGTTGCATTGAAGAGGGTGCGCTTTGATAATCTTGATGTTGAGAGTGTCAAGTTTATGGCAAGGGAAATATTTGTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGTTGGAAGGCTTGATAACATCACAGACATCTCGCAGCTTGTACCTTGTTTTTGAATACATGGAACACGATCTTACAGGACTTACATCAAGTCATAGCATTAAGTTTTCTGAACCGCAGGTTAAATGCTACATGCGGCAGCTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCACCGCGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCATCTTAAAGATTGCAGATTTTGGTCTGGCAAATTTTGTTGACCCCCATCACAAGGTTCCATTGACCAGCCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTAATTATGGAGTTGCTGTGGATTTGTGGAGCACTGGTTGCATACTGGGGGAACTATATTGTGGCAGACCTATATTACCTGCAAAAACAGAGGTTGAACAATTGCATAGGATTTTTAAACTTTGTGGCTCACCATCTGAGGACTATTGGCGTAAGCTGCGGACACCACATTCAACAGTATTCAGGCCTCCCCACCATTATAGGCGTTGTGTTGCTGAAACATTTAAAGAATGTCCATCTGCTGCTACAAGGCTTATCGAAACCCTACTTTCTTTAGATCCCACACTTCGAGGAACAGCAGAAACAGCCCTAAAGAGTGAGTTCTTTTCATCGGAACCCCTTCCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAAATTGACACTAAATTGTGGGAAGAAGCAACAAGGCACGGAGCTGATGGGGTAAAGGAGCAAAAATTTAGACCAGGAGGTCGACAAGAGAAAGAACCTCAGACATTTATATTATCCAAAGACAATGCTGACTCTGGCACATCAATGCAGCAAGGGAAACGCCTTCCAAACTCAAGGAGCCGGAATGAATTCTTCAACCCTCACAGAGAACCTGTGTCTGGACATTTGGTTTATCCACACAAACAGTCAGAAGATCATAAAGAAGTGGTAAATTATTTCTCCGGGCCTCTTTATCAGAGGCCTTTGCATTCAGGTCCATTGGTTCCAGGTTATGGCTGTGACATGGCTGGAAAGGAACACAAAGTCAACCTACCAAAACTTTCTGGGTTAGTGGCATCTAGGACTTCATTGTCTGGAGATCAAAAAGAAAATCCAGTTCCCTCGGGGCCCCGAGAAACAATTCAAGTCCAAAAATCTTTGGAGTCAACTAATGGATCAGATTCAAGAAGGCGGCATGATAAAAAACGCCATTCTCAGAGAATTGATCCCAGGCAAATCGAAAACGGAAAAGTCTCAACTGAAACATTAATTCAGGACGGGCATGGACCCATGGGAAACAACATCTACCACCTCTCTGGTCCATTACTAGTTTCATCAAACAATGTGGATCAGATGCTCAAAGAGCGTGATCGAAAGATCCAAGAATATTCAAGACGAGCAAGAATGTACAAGTCCGGTGAGATAGCTCATGCAAAGCAAAATTAG 2079 0.4334 MGCITSKNAAVEDSREGVTRELTSSSKRASKMKVSASNSEKRVDGVRRKDKVLHGADMKVSLIDKESNGSMRLCDGQNGKKKKEKPELAILDHPGLGRVPKGLEGEQVAAGWPTWLSSVAGEAIQGWIPRKADTFERFYKIGQGTYSTVYKARDLTHQKIVALKRVRFDNLDVESVKFMAREIFVLRRLDHPNVIKLEGLITSQTSRSLYLVFEYMEHDLTGLTSSHSIKFSEPQVKCYMRQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLANFVDPHHKVPLTSRVVTLWYRPPELLLGASNYGVAVDLWSTGCILGELYCGRPILPAKTEVEQLHRIFKLCGSPSEDYWRKLRTPHSTVFRPPHHYRRCVAETFKECPSAATRLIETLLSLDPTLRGTAETALKSEFFSSEPLPCDPSSLPKYPPSKEIDTKLWEEATRHGADGVKEQKFRPGGRQEKEPQTFILSKDNADSGTSMQQGKRLPNSRSRNEFFNPHREPVSGHLVYPHKQSEDHKEVVNYFSGPLYQRPLHSGPLVPGYGCDMAGKEHKVNLPKLSGLVASRTSLSGDQKENPVPSGPRETIQVQKSLESTNGSDSRRRHDKKRHSQRIDPRQIENGKVSTETLIQDGHGPMGNNIYHLSGPLLVSSNNVDQMLKERDRKIQEYSRRARMYKSGEIAHAKQN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo58g00006 692 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Pumo58g00006 692 MobiDBLite consensus disorder prediction 34 50 - -
Pumo58g00006 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Pumo58g00006 692 MobiDBLite consensus disorder prediction 457 475 - -
Pumo58g00006 692 MobiDBLite consensus disorder prediction 573 629 - -
Pumo58g00006 692 CDD STKc_CDK9_like 135 419 - -
Pumo58g00006 692 MobiDBLite consensus disorder prediction 457 498 - -
Pumo58g00006 692 MobiDBLite consensus disorder prediction 573 601 - -
Pumo58g00006 692 PANTHER CELL DIVISION PROTEIN KINASE 133 425 - -
Pumo58g00006 692 Gene3D Transferase(Phosphotransferase) domain 1 218 457 - -
Pumo58g00006 692 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo58g00006 692 SUPERFAMILY Protein kinase-like (PK-like) 129 427 IPR011009 -
Pumo58g00006 692 MobiDBLite consensus disorder prediction 476 498 - -
Pumo58g00006 692 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo58g00006 692 FunFam probable serine/threonine-protein kinase At1g54610 218 459 - -
Pumo58g00006 692 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Pumo58g00006 692 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Pumo58g00006 692 Pfam Protein kinase domain 136 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo58g00006 692 MobiDBLite consensus disorder prediction 1 50 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo58g00006 127 462 Core Cell Cycle Gene Families AT5G10270 48.295 1.22e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo58g00006 Pkinase 2.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo58g00006 - K08819 gmx:100775462 1267.29