Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo58g00005 ATGAAGGATTTGTTAACAACAGGCATGCATATGAGCAGTAATGCCCTTGCCATTGTAACTGAATTGGCTAACACTGTTAACGATTGGAATGTCACAAAATTACTTGGGCGTCGCCTTCTTCAAGATTCTGAGCTTCCCACATGGGTTGATCAACGTAGACTCCTTAATGCAAACACAATTCCATTCAAACATAAGCCTAATGTTACTGTAGCCATAGATGGTAGCGGAGATTTCAAAAGCATCAATGAGGCATTGAAGCAAGTGCCTGAGAAAAATCGAAAGTTGTTTGTGATCTACATCAAGGAGGGCGTTTACCAAGAGTATGTTGAAGTTACAAAGGAAATGACCCACGTGGTGTTTATTGGTGAAGGTGGAAAAAAGACACGAATAACCGGCAACAAAAATTTCATAGATGGAATTAACACTTATAGAACTGCCACTGTTGCTATTCAAGGAGATCACTTTGTGGCCATCAATATGGGGTTTGAAAACTCTGCTGGACCTCAAAAGCATCAGGCAGTGGCATTGAGAGTGCAAGCAGACAAGTCCATCTTCTACAATTGCTCAATGGATGGGTATCAGGACACACTTTATGCACACACCATGCGTCAATTCTATAGGGATTGCACCATTTCAGGTACCATTGACTTTGTGTTCGGTAATGCACTTGCTGTCTTCCAAAATTGCACTTTCGTGGTTCGAAAGCCACTAGAGAACCAACAATGCATTGTGACTGCACAAGGTAGAAAAGAGAGACAACAACCATCTGGAATAGTAATCCAAGGGGGATCTATTGTGTCTGACCCTGAGTTCTACTCAGTGAGATTTGAGAACAAGGCTTACCTAGCCCGTCCATGGAAGAATTACTCTAGGACCATCATCATGGACACTTACATTGATGATTTGATTCATGCTGATGGGTATATGCCATGGCAAGGACTAGAGGGCCCTTCTGGTATGGATACTTGCTTTTATGCCGAGTACCACAACACTGGCCCTGGTTCAGACAAATCCAAGCGTGTTAATTGGGTTGGGATTTTGAACCTCAATTCAAAAGCTGCAAATTGGTTCTCACCATCTAAGTTCTTTCATGGAACTGACTGGATTGAGGTTACTGGGATTCCTTGCTTCCCTGATGTGCCCACGCACCATAAGCACAAAAAGACTATACTTAACTGGTGA 1182 0.4264 MKDLLTTGMHMSSNALAIVTELANTVNDWNVTKLLGRRLLQDSELPTWVDQRRLLNANTIPFKHKPNVTVAIDGSGDFKSINEALKQVPEKNRKLFVIYIKEGVYQEYVEVTKEMTHVVFIGEGGKKTRITGNKNFIDGINTYRTATVAIQGDHFVAINMGFENSAGPQKHQAVALRVQADKSIFYNCSMDGYQDTLYAHTMRQFYRDCTISGTIDFVFGNALAVFQNCTFVVRKPLENQQCIVTAQGRKERQQPSGIVIQGGSIVSDPEFYSVRFENKAYLARPWKNYSRTIIMDTYIDDLIHADGYMPWQGLEGPSGMDTCFYAEYHNTGPGSDKSKRVNWVGILNLNSKAANWFSPSKFFHGTDWIEVTGIPCFPDVPTHHKHKKTILNW 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo58g00005 393 ProSitePatterns Pectinesterase signature 2. 211 220 IPR033131 -
Pumo58g00005 393 ProSitePatterns Pectinesterase signature 1. 92 111 IPR018040 -
Pumo58g00005 393 PANTHER PECTINESTERASE 5 370 - -
Pumo58g00005 393 Pfam Pectinesterase 67 365 IPR000070 GO:0030599|GO:0042545
Pumo58g00005 393 SUPERFAMILY Pectin lyase-like 65 377 IPR011050 -
Pumo58g00005 393 FunFam Pectinesterase 62 380 - -
Pumo58g00005 393 Gene3D - 65 380 IPR012334 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo58g00005 1 375 Carbohydrate Esterase AT3G05610 54.111 1.12e-147 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo58g00005 K01051 - gmx:100803527 761.525