Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo58g00004 ATGTCTCCTCGTACTTTGTTTTTCCTCGTTTCAACTCTTCTTCTAGTTCTGAGTTTGGTGTCAGCAACTGAATTTGTCTACAACAGAAACTTCAACTCCTCTAACGTGAAACTCTATGGGAATGCCACCATAGAAAACTCAGTTCTTAGACTCACAAACCAAACTTTCTTCTCCATAGGGCGTGCTTTTTACCCTCACAAAATACCCATGAAGCCACCAAACTCTTCCCTGGTTCTGCCTTTTGCAACCTCTTTCATCTTCTCTGTTGCTCCCTGCGAGAACTTCCCTGTTGCTCATGGTTTTGCGTTTGTTTTCATGCCCGTGATGGCCGTGAATGGAGCACTCTCGGGGAACTACTTGGGCCTCTTTAACCGCTCCACTTCAGGTAACTCTTCCAACCATGTTTTTGCGGTTGAGTTTGATGATTTTAGGAACGAGGAGTTCAATGAGGAGAATGATAACCATGTGGGTGTGGACTTGAATTCGATGATGTCGGTGTATTCGGAGCCTGCTGGGTTCTGGGGTGGGAGAGAGGGTGAGGAATTGGAGGATTTGAAGCTTGCTGATGGTAGAAACTATCAGGTTTGGATTGAGTTTGAGAATTCAGTGATTAATGTTACTATGGCACCAGCAGGGAAAAAGAAGCCTCATAGGCCTTTGATTAGTAAGCCTATTAACCTTTCTTGGGTCTTGTTGGATGAAATGTATGTGGGGTTTTCTGGAGCAACAGGGAGAATGGTGGACATTTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCTAATTTTTCAATTGGTGATGCTTTGAGTACCAAGCATTTGCCCTTGTATGTGCATCCAAAGACATTGCTGTTTAGATCAAATGGTTTCATTATAGGTGTAACTTTTGGGGCATTTTTTGTGGGTGGCTTCTGTGCTTTGGTGGTTTTTTACAGTTTGTACAGAACCAGAAGGGAAGAGAAGCAGGAAAATTTTGAAGACTGGGAATTGGAGTATTGGCCACACAGGATTAGCTATCAGAAGATTTGTGATGCAACAAGTGGATTCTCTGAAGAGAAAGTGATTGGGATTGGAACAAGTGGGAAGGTATACAAGGGGGTTTTGAAGGGAGTAGAAGTTGCAGTGAAGAGCATCAATCATGAGACTCGCCACGGAATGAGAGAGTTTCTGGCAGAGATTTCAAGCCTAGGAAGAATGAAACACAGGAATTTAGTGGGTTTCAGAGGTTGGAGTAAAAGAAAAGGAGGAAAACTGATACTGGTTTATGATTACATGGTGAATGAGAGCTTGGACAAAAGGATCTTTGAGTGTGAAGAGGCCATGCTTCTGAGCTGGGAAGAAAGAATTAGAGTTTTGCAAAATGTAGCTGATGGAATCTTATATCTACATGAGGGTTGGGAAGTTGAGGTCTTGCATAGGGACATCAAAGCTTGTAATGTACTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGGCTTGCAAGGCTTCATCACCAGGAACATGTAGTTGACACAACAAGGGTGATAGGAACTCTGGGGTACATGGCACCAGAACTAATCCGAATTGGGCGACCATCAGCTGCTTGTGATGTGTATAGTTTTGGAGTATTGGTTTTAGAAGTGGTGTGTGGGAGAAGACCCATCATAGCAGATCAGCCACCATTGGTTGATTGGGTGTTTTCCCTTATGGAGAATGGGGAATTGAGTTGTGCTATTGATGAGCGTTTGAAGGGTCAAAGTGGATACAATGCTGAGGAAGCTGAGAGGCTGCTTCATTTGGGTTTGTTATGTGTGAGTACAGACCCTGGTCTTAGGCCAACAATGAGGCAAGTGGTGAAAGCATTGGAGGGAATAAAATGCACCGAGTGTAATGAAGATTGCATCCATTTGAGTCTGCTTGGAAAAATAAACTCAGCAGCATCATGGTCTAAGAGTTCTACAAGTTCTGCCAATGTAACTTATCCTACCTTTGATGAAATTTTGCAGACCAAGTTTTATTCTACAGCATCTTTAAGTGTCTCTTGTCCCAGTCCACAGCCAGAGTCAGAGTTTGTCTCAGAAGGAAGGTGA 2073 0.4317 MSPRTLFFLVSTLLLVLSLVSATEFVYNRNFNSSNVKLYGNATIENSVLRLTNQTFFSIGRAFYPHKIPMKPPNSSLVLPFATSFIFSVAPCENFPVAHGFAFVFMPVMAVNGALSGNYLGLFNRSTSGNSSNHVFAVEFDDFRNEEFNEENDNHVGVDLNSMMSVYSEPAGFWGGREGEELEDLKLADGRNYQVWIEFENSVINVTMAPAGKKKPHRPLISKPINLSWVLLDEMYVGFSGATGRMVDICRILAWSFSNSNFSIGDALSTKHLPLYVHPKTLLFRSNGFIIGVTFGAFFVGGFCALVVFYSLYRTRREEKQENFEDWELEYWPHRISYQKICDATSGFSEEKVIGIGTSGKVYKGVLKGVEVAVKSINHETRHGMREFLAEISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMVNESLDKRIFECEEAMLLSWEERIRVLQNVADGILYLHEGWEVEVLHRDIKACNVLLDKDMNARLGDFGLARLHHQEHVVDTTRVIGTLGYMAPELIRIGRPSAACDVYSFGVLVLEVVCGRRPIIADQPPLVDWVFSLMENGELSCAIDERLKGQSGYNAEEAERLLHLGLLCVSTDPGLRPTMRQVVKALEGIKCTECNEDCIHLSLLGKINSAASWSKSSTSSANVTYPTFDEILQTKFYSTASLSVSCPSPQPESEFVSEGR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo58g00004 690 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Pumo58g00004 690 SUPERFAMILY Protein kinase-like (PK-like) 322 617 IPR011009 -
Pumo58g00004 690 PANTHER - 22 618 - -
Pumo58g00004 690 Gene3D - 21 268 - -
Pumo58g00004 690 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Pumo58g00004 690 CDD lectin_legume_LecRK_Arcelin_ConA 23 260 IPR001220 GO:0030246
Pumo58g00004 690 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo58g00004 690 ProSiteProfiles Protein kinase domain profile. 348 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo58g00004 690 FunFam L-type lectin-domain containing receptor kinase S.4 424 627 - -
Pumo58g00004 690 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 310 423 - -
Pumo58g00004 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pumo58g00004 690 FunFam L-type lectin-domain containing receptor kinase S.4 21 265 - -
Pumo58g00004 690 Gene3D Transferase(Phosphotransferase) domain 1 424 632 - -
Pumo58g00004 690 SMART serkin_6 348 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo58g00004 690 ProSitePatterns Protein kinases ATP-binding region signature. 354 375 IPR017441 GO:0005524
Pumo58g00004 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 268 IPR013320 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo58g00004 20 565 Receptor kinase-like Gene Family AT4G04960 55.898 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo58g00004 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo58g00004 - - gmx:100804025 1244.57