Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo51g00003 ATGCAACGCGGGGGTGCTTGTGGATACGGTGACAATGTGGAGAAACCTCCACTCTCTAAAATAGTATCAGCTGGAGGTCCTTCTCTTTTCCGTGGCGGCATAGGGTGCGGGGCTTGTTATCAGAATACGAAAATGGGGATGGTTGTGGACATTGAGTTGAAGCAAGCTAATTCTGACACGTGGCTTCCAATGGAGCGTTCATGGGGTGCAAGGTGGGCTTTGAACTTAGGTTTAGAATTACAAGCGCCATTCTCTATTAAGCTCACAGAAGAAGGCAAGGGCTATTACAAGACCATTGTGGCTGATAGTGTAATTCCGCATGACTGGAAACCTGGCCAAGTTTATCGATCTGTCGTTAATTTTTAA 366 0.4645 MQRGGACGYGDNVEKPPLSKIVSAGGPSLFRGGIGCGACYQNTKMGMVVDIELKQANSDTWLPMERSWGARWALNLGLELQAPFSIKLTEEGKGYYKTIVADSVIPHDWKPGQVYRSVVNF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo51g00003 121 SUPERFAMILY Barwin-like endoglucanases 3 42 IPR036908 -
Pumo51g00003 121 Gene3D - 38 121 IPR036749 -
Pumo51g00003 121 PANTHER EXPANSIN-B3 47 121 - -
Pumo51g00003 121 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 46 117 IPR007117 -
Pumo51g00003 121 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 4 41 IPR007112 -
Pumo51g00003 121 SUPERFAMILY PHL pollen allergen 44 117 IPR036749 -
Pumo51g00003 121 Pfam Expansin C-terminal domain 44 106 IPR007117 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo51g00003 4 41 Expansin Gene Family AT1G65680 76.316 5.66e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo51g00003 - - gmx:100786475 143.665