Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04427 ATGGACCCTGAATTCCTTAGAGCACGATCTTTAACGCTAGAGAAAATATATAATAAACTATTGCAGCGGTACCAGCATCCAGTTACAGAAGCACATAAACAGAAGGTTAAGGATATTGCAAAACGGCTCGAAGAGGGCATGTTAAAAACTGCTATCTCTAAGGAGGACTACATGAACTTGGACACATTAGAGAGTCGCTTATCTAATTTCCTTAGACGGTCATCTATGACTAATCACAACCAACAACATCCACAGCTTGTTAGCTCTTCTCCAATTGGTACAATGATACCGACCCCTGGTATGTCACATGTTACAAATTCAACCATGAACGTAGCATCTTCTGTGGATGCCTCAATGATTGCTGCCAGTGGGTGTAACAGCATAGCATCCTCATCTGTCGATAGTGTAAGCATGTTACTAACAGGTGGCATGCTTGGCAGCTCCTTAAATAGATCTGATGGTAATTCTAGTTGTTTTGATTCCTTAGTCCTTTCAGTATGTTTTTCTTTCCCTGCATTATTGGGTCTACTTATTGCAGGTTTGTCTAATGGTTACCAGCAGTCTTCTACAAATTTTTCTGTTGGTTCAGGAGGAAACATGTCATCGGTGGGGGTGCAAAGAGTTACTAGCCAGATGATTCCAACTCCAGGATTTAGTTCACAGTCACAGTCACAGCTGCAGCAGCACCAGAAGCTGCAAGACAGTGACCACAACAATCATGCTTTGCACAGCCTTGGCAGTCAAATGGATGGTGGAATGGGATCTGATTTGCTGCAAAATTCATTTGCATATCCAAATGGTTCTATAAATAATGGGCTAGGCTTGATTGGAAACAACATACAACTTGCAAACGAACCTGGCACTGATGACTATGCTTCTATGTACACTAATTCCCCTAAACACTTACAGCAGCACTTTGATCAAAATCAACAACCAGTAGTGCAGGGTGACAGATATGGATTGATTAATGTTGACACTTTTACTTCTGGAAGCTTCTATGCATCTGCGACATCCTCTGGGTCTATGATGAACACTCAGAACATGAATGCAGTAAAATTGCCATCAATACCCATTACCAGCTCACTGATGGGTGGTCATACTAATTTGAACAGTATGCATCAGAATGCTCATCAAAAGTCTCAAGCAATAAATTCATTGAAAAATTTAAAATTCCAGTCTTCGTTGACTTCAAGAGATGGCCATGTGCATACTCAACAGCAATATCAGCAAAGACCCCAACAATGTCACCAGTCAGAGCGGTATGCTCCACAGCAATTTCAACTGAAGCTGCAAGGTCAGCAACCTCAGCATTTGGTCAACAATGATGCCTTCACTCAGTCTCAGCTCTCTTCCAATCTAGACAATAAAGTTAAGTCTGAGTCTGGAGTTGAACCACATAAAGAAGTTCTTGATTCTCAGCTTTCTGAACAGTTCCATGTATCTGAGATGCAGAACCAGTTCCAGCAATTTTCTTCTAAAGATTGCTCTAAGGTTGCTCAACATCTTTCATTGGGCCAGCACGACTCATCCTCATCACCACCTCAAATTTCACAACAAATGTTGCATCCACATCAATTGGTTTCAGAGTCACAAAATAATTTTAGCCGTCTTTCAGTTGGGGCACAATCCACATCCATACTAATAAATCAATGGCCTCGATCACTAGATGAAAACCACATTCCTCAGGGTATGTCACATGAACAGCATCTTCCCATGGATTTTCATCAAAGAATATCAGGGCAAGACGAAGCTCAATGCAATACTTTATCATCAGATGGATCTATTATTGGTCAAGCTGTTGCTACTAGAAGCTCAACTGAGCTGCTAGACCCGAGCAGTACTATAAAGAAGGCACACAGGAATCAACAGAGGTGGCTTTTATTTTTACTTCATGCTCGACGCTGTTCTGCCCCAGAAGGGCAATGCCAAGAACGCCATTGTTCTAGTGCACAAAAGTTATGTAATCACATAGATGGATGCACTATACCTCATTGTCCATATCCTCGTTGTCATCATACCAGGAAATTGCTTCATCATTTCATAAAATGCAATAATCCACATTGCCCTGTTTGTGTTTTGGTAAGAAAGTATCGGCGTGCATTTCAACTTAAGCCCAAAATTCGGTCAGATCCTGAATCATGTTTGCCAAATGCTTTAAATGGATCCTGTGAATCCTATAATGTGGTGGGCCCATCACCTAGATTGATCTCAAAGTCTCCACTAGTGGTTGAAACTTCAGAAGACCTACCATCTCTAAAACGTATGAAAACTGAGCAGTGCACCCAGTCCATTAATCCTGAATATGACAATTCTTCTTCATCTGTTCTTCCAAATTGTGACTCACGAGATTTGAAGGATACTCAGTACCAAGCCTATCCCAGTTGTGACATGTCTATATCAACTAAATCTGAGCTTACTGAAGTTAAAGCAGAAGTTCTGGTGCATTCAATTCATGAAAATCTTAGCGAGACAAAAATGGACGAGGATAGTGCACATGATAAAAGGCCCACTGGTAAGCCTGTCACATATAATGAGCCTGCTAATATAGCTAGGCCAGAAAATATTAAAACTGAGAAAGACAGTGGACAAGATAAGCAAGAAAATGTGACCCAGCCATCTGATGGAGCTGGAACCAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCATTGACTGAGCTGTTTACTCCTGAGCAAGTCAGGGAACATATAACTGGCCTCAGGCGATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAATTGTGTGCTGTAGAGAAACTAACTTTTGAACCACCCCCTATTTATTGCACAACATGTGGTGTTCGGATTAAACGAAATAATATGTATTATACCATGGGTACCGGTGATACACGGCATTATTTTTGTATTCCGTGCTATAATGAGCCTCGTGGAGACACCATTGTTGTTGATGGGACTCCTTTTCCTAAGTCAAGGTTAGAAAAGAAGAAAAATGATGAGGAAACGGAGGAATGGTGGGTTCAATGTGATAAATGTGAGGCATGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGTGAGCGCAAGCCCTTACCCCAAAGTGCTGTTCTTGGAGCCAAGGATTTACCAAGAACAATTCTCAGTGACCACATAGAGCAACGATTATTTAGGAGACTAAAGCACGAAAGACAAGAGAGGGCCCGACTTCAAGGGAAAAGTTATGATGAGGTGCCTGGAGCTGAAGCTCTTGTTATAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTTAAACAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCGAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTCTTTGGCATGTATGTTCAAGAGTTCGGGTCTGAATGTCAATTTCCAAATCAACGCCGGGTTTATCTTTCATATCTCGACTCTGTAAAGTATTTTAGGCCTGAGGTTAAAGCAGTAACTGGAGAAGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTAGAATATTGCAAGAAACGCGGTTTTACAAGCTGCTACATATGGGCATGTCCTCCATTAAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTACCTGTGCATGTTAAGAAAAGCTTCCAAGGAGAATATTGTGGTTGATCTCACCAACATGTACGATCATTTCTTTGTATCTTCTGGTGAATGTAGGGCTAAGGTTACAGCGGCAAGGCTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAGAAAGGAACAACAAAGAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCAGATCTTTCTGGAAACACCTCAAAAGATCTTCTCCTAATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCACTCATTGCTGTATTCTAATGGTGTCTGGCAACCGTTGGGTTTGCAGGCAATGCAAGAATTTTCAGATTTGTGACAAGTGTTATGAAGCAGAACTAAAGCACGAAGAGAGAGAACGGCATCCTATTAACCAGAGGGAGAAACACACCCTTTATCCTGTAGAAATTACTGATGTACCTGCCGATACGAAGGACAAAGACGAGATTCTTGAGAGTGAATTCTTTGACACTAGGCAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTATCAATATGATACTCTAAGGCGGGCCAAGCATTCCTCTATGATGGTTCTGTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTACAACATGTAATATTTGCCGTCTTGACATAGAAACGGGCCAAGGTTGGCGTTGTGAAGTTTGCCCTGAATATGATGTGTGCAATGCTTGTTATCAAAAGGACGGTGGCACTGATCATCCTCATAAATTGACAAACCATCCATCAATGGCAGATCGTGATGCTCAGAACAAGGAAGCAAGGCAACTTCGAGTATTACAGTTACGAAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCCCATTGCCAATATCCAAATTGTCGCAAGGTGAAGGGGCTTTTCCGTCATGGGATGCATTGTAAAATCCGTGCCTCTGGAGGTTGTGTTCTATGCAAGAAAATGTGGTATTTGCTTCAACTCCATGCTCGTGCTTGCAAGGAATCTGAATGCCATGTACCACGTTGCAGAGATTTAAAAGAACACTTAAGGAGGTTGCAGCAACAGTCTGATTCAAGGCGAAGAGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAGTTCTGGATGA 5043 0.4146 MDPEFLRARSLTLEKIYNKLLQRYQHPVTEAHKQKVKDIAKRLEEGMLKTAISKEDYMNLDTLESRLSNFLRRSSMTNHNQQHPQLVSSSPIGTMIPTPGMSHVTNSTMNVASSVDASMIAASGCNSIASSSVDSVSMLLTGGMLGSSLNRSDGNSSCFDSLVLSVCFSFPALLGLLIAGLSNGYQQSSTNFSVGSGGNMSSVGVQRVTSQMIPTPGFSSQSQSQLQQHQKLQDSDHNNHALHSLGSQMDGGMGSDLLQNSFAYPNGSINNGLGLIGNNIQLANEPGTDDYASMYTNSPKHLQQHFDQNQQPVVQGDRYGLINVDTFTSGSFYASATSSGSMMNTQNMNAVKLPSIPITSSLMGGHTNLNSMHQNAHQKSQAINSLKNLKFQSSLTSRDGHVHTQQQYQQRPQQCHQSERYAPQQFQLKLQGQQPQHLVNNDAFTQSQLSSNLDNKVKSESGVEPHKEVLDSQLSEQFHVSEMQNQFQQFSSKDCSKVAQHLSLGQHDSSSSPPQISQQMLHPHQLVSESQNNFSRLSVGAQSTSILINQWPRSLDENHIPQGMSHEQHLPMDFHQRISGQDEAQCNTLSSDGSIIGQAVATRSSTELLDPSSTIKKAHRNQQRWLLFLLHARRCSAPEGQCQERHCSSAQKLCNHIDGCTIPHCPYPRCHHTRKLLHHFIKCNNPHCPVCVLVRKYRRAFQLKPKIRSDPESCLPNALNGSCESYNVVGPSPRLISKSPLVVETSEDLPSLKRMKTEQCTQSINPEYDNSSSSVLPNCDSRDLKDTQYQAYPSCDMSISTKSELTEVKAEVLVHSIHENLSETKMDEDSAHDKRPTGKPVTYNEPANIARPENIKTEKDSGQDKQENVTQPSDGAGTKSGKPKIKGVSLTELFTPEQVREHITGLRRWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNEPRGDTIVVDGTPFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKHERQERARLQGKSYDEVPGAEALVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLCMLRKASKENIVVDLTNMYDHFFVSSGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNTSKDLLLMHKLGETICPMKEDFIMVHLQHACTHCCILMVSGNRWVCRQCKNFQICDKCYEAELKHEERERHPINQREKHTLYPVEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICRLDIETGQGWRCEVCPEYDVCNACYQKDGGTDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKIRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANSSG 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04427 1680 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 999 1047 IPR013083 -
Pumo4g04427 1680 ProSiteProfiles Zinc finger ZZ-type profile. 1382 1445 IPR000433 GO:0008270
Pumo4g04427 1680 ProSitePatterns Zinc finger ZZ-type signature. 1507 1534 IPR000433 GO:0008270
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 499 522 - -
Pumo4g04427 1680 SUPERFAMILY TAZ domain 619 698 IPR035898 -
Pumo4g04427 1680 Gene3D TAZ domain 1559 1676 IPR035898 -
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 820 884 - -
Pumo4g04427 1680 SUPERFAMILY RING/U-box 1483 1551 - -
Pumo4g04427 1680 FunFam Histone acetyltransferase HAC1-like protein 1559 1676 - -
Pumo4g04427 1680 ProSiteProfiles Zinc finger TAZ-type profile. 1562 1645 IPR000197 -
Pumo4g04427 1680 SUPERFAMILY FYVE/PHD zinc finger 1008 1048 IPR011011 -
Pumo4g04427 1680 SMART TAZ_2 1565 1643 IPR000197 -
Pumo4g04427 1680 SMART TAZ_2 616 694 IPR000197 -
Pumo4g04427 1680 Pfam PHD-finger 1005 1047 IPR019787 -
Pumo4g04427 1680 Pfam Histone acetylation protein 1104 1324 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pumo4g04427 1680 ProSiteProfiles Zinc finger TAZ-type profile. 613 694 IPR000197 -
Pumo4g04427 1680 Gene3D TAZ domain 610 699 IPR035898 -
Pumo4g04427 1680 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1064 1500 IPR031162 GO:0004402
Pumo4g04427 1680 FunFam Histone acetyltransferase of the CBP family 12 1378 1437 - -
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 820 839 - -
Pumo4g04427 1680 SMART KAT11_2 1097 1394 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 395 421 - -
Pumo4g04427 1680 Pfam TAZ zinc finger 623 691 IPR000197 -
Pumo4g04427 1680 Pfam TAZ zinc finger 1572 1642 IPR000197 -
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 213 246 - -
Pumo4g04427 1680 Gene3D - 1501 1553 IPR043145 -
Pumo4g04427 1680 FunFam Histone acetyltransferase HAC1 1501 1552 - -
Pumo4g04427 1680 Pfam Zinc finger, ZZ type 1504 1545 IPR000433 GO:0008270
Pumo4g04427 1680 Gene3D - 1378 1437 IPR043145 -
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 213 232 - -
Pumo4g04427 1680 SUPERFAMILY TAZ domain 1564 1647 IPR035898 -
Pumo4g04427 1680 ProSiteProfiles Zinc finger ZZ-type profile. 1502 1555 IPR000433 GO:0008270
Pumo4g04427 1680 CDD PHD_HAC_like 974 1046 - -
Pumo4g04427 1680 PANTHER CBP/P300-RELATED 34 1671 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pumo4g04427 1680 SMART zz_5 1501 1547 IPR000433 GO:0008270
Pumo4g04427 1680 SMART zz_5 1381 1425 IPR000433 GO:0008270
Pumo4g04427 1680 MobiDBLite consensus disorder prediction 1328 1353 - -
Pumo4g04427 1680 SUPERFAMILY RING/U-box 1362 1433 - -
Pumo4g04427 1680 ProSitePatterns Zinc finger PHD-type signature. 975 1046 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04427 Pumo-Chr4 85351057 85368605 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pumo4g04427 HAT_KAT11 1.1e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04427 K04498 - gmx:100800511 3044.6