Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04425 ATGTGGCTTCCAAATCCTAAAGCATCAGGGATTAGAAAGGGAGGAGGAGGAAATGGATTAGTGGCAGTGGCTATAGACAAGGATAAAGGAAGCCAATGCGCTCTTAAATGGGCTGTTGATTGTCTTCTTACCAGAGGTCAAACTGTTATTCTAATCCACGTTTTGCACGGGACATCCTCACCTGTGTCCAGGGGTAACGAGGCCATTATATGTAACATCAACAGTTCATCTGCATCTCCGCAGAATTATCAACTTGATAACACTACCAAGGACCTGTTTCTCACTTTCCATTGCTATTGTACACGCAAAGATATACAATGCCTTGATGTCCTACTTGAAGACACTGATGTCGTGAAAGCAATAACAGAATATGTCTCTTATGCTGCAATTGAGAACTTGGTGGTTGGTGCAACATCCAGGCATGGGTTTATTCGATTTAAGTCATCAAGTGCATCAAGTAGCATATCAAAGGGGGCGCCGGACTTTTGTACCGTGTTTGTCATTTCAAAGGGCAAAGTCTCTTCAGTTCGGAATGCTACTCGTCCAGCCGCACATACATCTCCACTTCTGAGCCATATACATAATCTAAATCACCGGGACGGAAATCAACCTGAGATATCCTCCAGACCTACGAATTTGAGAGACAGGACATCAATCAAACCTAACAACTGTTTGGATGAATCTATTAAGTCTCCATTTGGAAGAGGAAGAGGCACGGGTGGAATGTCATGCGTGGACTTCCCAGAATCAGATACAGACATATCATTTGTAAGCTCCGAGAGGCCAAGCAGTGGACGTTCATCCTCCGTTTATGACTACATTGACGCAGGCCGAACTTCTCGACTTTCTACCAGTTCAGATCATAGCTTTGGATCAATCCGATTGGGACTCAAGTTCAATGACCCCAATTCACCAGATATGTCATTCTCACATGAAAGCACTGGAACATCATTTTCATATTCATCACAGAGCGTGGATGAAGCGGCAGAAGCTGATATGAGGAGGCTGAAGCTTGAGTTAAAGCAAACGATGGAAATGTACAGTACAGCGTGCAGAGAAGCACTTACATCACAGCAGAAGTTAATGGAGTTGACCCACTGGAGAATTGAGGAAGAAAAAAAATTAGAAGAGGCACGATTAGCTCAGGAAGCTGCCATGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCATCTAAGAAAATTGCAGAGGTGGAAACACACAGAAGAGCGAGTGTTGAAGTTAAAGCTCTTAAAGAAGCGGAGGAAATGAGGAAGCTATTGGACAATCTAGCCCAAACTGATGTAAGATATAGGAGATACAGTATAGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGAATCCCTGAGAATCGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGATTGACATACTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTAGGAGCCTGTCCGGAGTATGGCATATTGATTTATGAATATATGGCTAATGGAAGCTTAGAAGATTGTCTGTTTCAAAAAAAGAAGAAGAGTGTTCTGTCTTGGCAGCTGAGATTCCGAATTGCCGCAGAGATAGCAACGGGCTTACTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATTTGAAACCAGGCAACATTTTGCTAGACCAAAATTATGTGAGCAAGATAAGCGATGTTGGATTGGCAAGGCTTGTCCCAGCTGTAGCTGAAAATGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCCGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCGGATGTTTATTCTCTGGGGATCATTTTTCTTCAATTATTGACAGGCAGGCCTCCAATGGGATTGGCTCACCATGCTGGAGAGTCTATAGAGAAGGACAATTTCAAGGAAATGCTGGACCCATCTGTCACTGACTGGCCTCTGGAACAAGCCCTGTGCCTTGCAAACATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGATAGGCCAGACCTTGCCAAACTAGTGTTGCCAGAGCTAGATAAATTGAGAGACTTTGCCGAAGAAAACATGACCATGACCATGCCCATCTTTTTAGGATGCACTGCGCCTTCACCCAGCCACAGTGAAGCATCCGTGCAACAGGATGTGATGAGCGACCCGCAGCTTGTACATTCGGAAAGCTCATCAGCTCCATCAACGCCCACAGAAGGAAAACCTTAA 2349 0.447 MWLPNPKASGIRKGGGGNGLVAVAIDKDKGSQCALKWAVDCLLTRGQTVILIHVLHGTSSPVSRGNEAIICNINSSSASPQNYQLDNTTKDLFLTFHCYCTRKDIQCLDVLLEDTDVVKAITEYVSYAAIENLVVGATSRHGFIRFKSSSASSSISKGAPDFCTVFVISKGKVSSVRNATRPAAHTSPLLSHIHNLNHRDGNQPEISSRPTNLRDRTSIKPNNCLDESIKSPFGRGRGTGGMSCVDFPESDTDISFVSSERPSSGRSSSVYDYIDAGRTSRLSTSSDHSFGSIRLGLKFNDPNSPDMSFSHESTGTSFSYSSQSVDEAAEADMRRLKLELKQTMEMYSTACREALTSQQKLMELTHWRIEEEKKLEEARLAQEAAMAIAEKEKARCRAAMETAEASKKIAEVETHRRASVEVKALKEAEEMRKLLDNLAQTDVRYRRYSIEEIEAATNFFSESLRIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFQKKKKSVLSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHHAGESIEKDNFKEMLDPSVTDWPLEQALCLANIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEENMTMTMPIFLGCTAPSPSHSEASVQQDVMSDPQLVHSESSSAPSTPTEGKP 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04425 782 FunFam U-box domain-containing protein 51 533 732 - -
Pumo4g04425 782 MobiDBLite consensus disorder prediction 194 225 - -
Pumo4g04425 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Pumo4g04425 782 Gene3D Phosphorylase Kinase; domain 1 438 532 - -
Pumo4g04425 782 PANTHER OS02G0152300 PROTEIN 21 765 - -
Pumo4g04425 782 Coils Coil 326 346 - -
Pumo4g04425 782 Pfam Universal stress protein family 21 160 IPR006016 -
Pumo4g04425 782 CDD STK_N 20 171 - -
Pumo4g04425 782 Coils Coil 372 406 - -
Pumo4g04425 782 ProSiteProfiles Protein kinase domain profile. 460 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04425 782 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 168 - -
Pumo4g04425 782 Pfam Protein kinase domain 463 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04425 782 SUPERFAMILY Protein kinase-like (PK-like) 443 718 IPR011009 -
Pumo4g04425 782 Gene3D HUPs 20 168 IPR014729 -
Pumo4g04425 782 MobiDBLite consensus disorder prediction 747 782 - -
Pumo4g04425 782 MobiDBLite consensus disorder prediction 746 782 - -
Pumo4g04425 782 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 432 532 - -
Pumo4g04425 782 MobiDBLite consensus disorder prediction 194 237 - -
Pumo4g04425 782 SMART serkin_6 460 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04425 782 Gene3D Transferase(Phosphotransferase) domain 1 533 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04425 Pumo-Chr4 85318540 85323183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04425 1 764 Receptor kinase-like Gene Family AT1G78940 56.978 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pumo4g04425 Pkinase 8.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04425 - - gmx:100801601 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04425 4 85318540 85323183 Pumo7g00013 7 379075 382557 PCT