Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04423 ATGGAAGGGGATGGTTGTGATGTGAAGATGTTGGTTAAAATTCACACAAATTGGTTTGTCCCAGTCCGACTGGCACACAAGATAGAGGGTTGTTTTGTGTTGAGTAGGCATCCTGGAAGAAGATCAAATTGGTGTTGTGGTTGTGGACGTGGTTCAGGGGGGGAATGGGAAGTGCAGGAAGCTCGTAGGGCCGTTTCAAGTTATCTTGGAGAATTGGGAGTGTCGGAGAAGGAATCGGTGTGGATGGCGTCAAAGTCACCCGGTTACGTGAAGATGTTGGTGGAAGGTGTGAGGGATTTGGAGCAGTGCGAGTGGGACGAACAAATTGCGGGGTTGAGCTTCAAGGACAAGATTCTTCATATCGCCGCTCAAAAAGGGGACAAGGGAAAAGTTGCCTACTTAGAGACTCTGGGCTTTACTCTCTCTTCCTCTATGTACATCGCCAGATATCTCTCCGCTGACACTCGCACCCTTCCATCTCTCATACACAAGGTTACGCGTATGAAACAACTCTTCTTTTCTGTCACTGCCGACCATGATGACTTCCACTTCCACTTGCTTATCAAAAATATTCGCCTCATGATGCGCCACCTCTCTATTTCTATTGATGAAGACCTGCAACACACTTTGTCCTTTTTCGAAAAGCTTGAAGCAAAGCGTGGTGGACTAAACATTTTGGCCTCCAAAGATGCCGCTTTCCATTACTTAATCGAATCTTTTCCTCGTCTACTTCTGTTATCAGTAGACAACCATTTCACACCCATACTCCATTTTCTCCACAATTTTGGAATCCCCACATTTCGCATCTCAAACATAATACTGGCTTTTCCTCCTCTTCTCTTCTGGAATCTTCAACTCCTTCAAACTAGACTCCTCGCCTTGAAGGAGATTGACGTGGCTGATAAAGATTATGCTAAGTTGTTGCTAAAATATCCTTGGCTTTTATCTACAAGCATTCAAGACAATTATACGGAGCTCCTTGCCTTTTCATATTCTATCAAGGTTCCAAAGACACAGATAGACCGTGCGATTGAAAGCCACCCTCATCTATTGAGTTGTTCAACTAGCAAGCTGAAGTTGATGGTGGATCAGTTTGCTGAACTAGGCGTTCGAAACAAAAAGTTAAATCAGGTTATTGCTAAAAGTCCTCAACTACTATTACGGAAGCCCAAAGATTTTCTACAGATTGTTCTGTTGTTTGAAAATATGGATTTTGATAAAGAAACTATTGGAAGAATACTTGCTCGCTGCCCTGAAATTTTTGCTGCCAGCATTAATAAAACTCTACAGAGGAAGATTGAGTTCCTTGGTAGGGTTGGTGTTTCTAAAACTTTCCTTCCTGGGGTTATCAGAAAGTATCCAGAATTACTTGTTTCTGACATTGACAAAACTTTACTACAAAGGATAATGTACTTGATGAAGTTAGGGCTTTCAGAGGAAGACATTGCATATATGGTACGTACATTTTCTCCTCTCCTTGGGTACAGTATAGAGGGGGTTCTTAGGCCAAAAATAGAATTCCTTGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGGGCTACCCTAGGTATTTTAGCTATTCACTAGAGAAGAAGATAAAGCCAAGATATTGGGTGTTGAAAGGAAGGGATATCAAATGTAGCTTAAAGGATATGCTGGGGAAAAATGATGAAGAATTTGCTGCTGAATTTATGGATATCGGAAGGATGCTCGTCTGTCTTCCTGTGTCTTCTAATGATAGCTTGTAA 1752 0.4224 MEGDGCDVKMLVKIHTNWFVPVRLAHKIEGCFVLSRHPGRRSNWCCGCGRGSGGEWEVQEARRAVSSYLGELGVSEKESVWMASKSPGYVKMLVEGVRDLEQCEWDEQIAGLSFKDKILHIAAQKGDKGKVAYLETLGFTLSSSMYIARYLSADTRTLPSLIHKVTRMKQLFFSVTADHDDFHFHLLIKNIRLMMRHLSISIDEDLQHTLSFFEKLEAKRGGLNILASKDAAFHYLIESFPRLLLLSVDNHFTPILHFLHNFGIPTFRISNIILAFPPLLFWNLQLLQTRLLALKEIDVADKDYAKLLLKYPWLLSTSIQDNYTELLAFSYSIKVPKTQIDRAIESHPHLLSCSTSKLKLMVDQFAELGVRNKKLNQVIAKSPQLLLRKPKDFLQIVLLFENMDFDKETIGRILARCPEIFAASINKTLQRKIEFLGRVGVSKTFLPGVIRKYPELLVSDIDKTLLQRIMYLMKLGLSEEDIAYMVRTFSPLLGYSIEGVLRPKIEFLVNSMERPVRDVVGYPRYFSYSLEKKIKPRYWVLKGRDIKCSLKDMLGKNDEEFAAEFMDIGRMLVCLPVSSNDSL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04423 583 FunFam Mitochondrial transcription termination factor family protein 356 569 - -
Pumo4g04423 583 Pfam mTERF 256 562 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 341 371 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 376 406 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 270 300 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 483 515 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 SMART mt_12 516 547 IPR003690 GO:0003690|GO:0006355
Pumo4g04423 583 Gene3D Transcription termination factor 3, mitochondrial 357 569 IPR038538 -
Pumo4g04423 583 PANTHER CGI-12 PROTEIN-RELATED 468 567 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo4g04423 mTERF 2.3e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04423 K15032 - gmx:100802127 933.324