Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04410 ATGATGGGTTCGGTTGTAGAGGACAAGATAGAGCGTGATAGTTTTGACGACGACGACGACGATGAAACTCCCTTCGCGTCTTCTTCTCCATCTGCCTCTAAAGTCCTCCACCATACCTTCAATTTCGAGGAGACAAACAGCGTTGTAGATTTGCGGAGGTCATCCATCTTTAACATGACACGTATCAGCAGGAGTATATATTTTGTCTTAATTAAAGCCAAGATCAACCTCTTGCTTCCCTTTGGTCCATTCGCCATTCTCTTACATTACCTAACTGGACATCATGGGTGGGTCTTCTTCTTCACCTTATTGGGGATTACTCCTTTGGCAGAACGTCTTGGTTATGCTACCGAGCAGCTTGCCTTCTACACAGGTCCAACAGTTGGGGGTCTGCTTAATGCCACATTTGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAGCAATATGATAAGAGTTGTTCAGCAATCTTTACTTGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGCTGTGCATTCTTTACTGGTGGCATTGTCCACTACAAAAAAGAACAGAAGTTTGATAAGGCAGCTGCTGTGGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATACTATTTCCTGCTGTGCTTTACTTTACTCACTCAGAAGTTCATCAAGGGAAGTCAGTGTTGTCTCTATCAAGATTTAGCAGCTGCATAATGCTAGTGGCCTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAAAATGATTATCGTTCAGTTGATGAGGAAGGAGATAATGGTGAACATTCTGATGTGGAGGAAGAACTTGAATTAACTCAATGGGAGGCAATAATCTGGCTTGCTATTTTGACAGCATGGGTATCAATATTGTCTGGATACCTTGTAGATGCCTTACAGGGAGCATCTGAGTCGTTGAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAATGCTGCTGAACATGCCAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTGATATCACTATTGGAGTTGCTATTGGATCATCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGTTAGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAGTTACTGAGAATATACTGCATAGATTCACAGTAG 1344 0.4085 MMGSVVEDKIERDSFDDDDDDETPFASSSPSASKVLHHTFNFEETNSVVDLRRSSIFNMTRISRSIYFVLIKAKINLLLPFGPFAILLHYLTGHHGWVFFFTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKEQKFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHQGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNDYRSVDEEGDNGEHSDVEEELELTQWEAIIWLAILTAWVSILSGYLVDALQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGELLRIYCIDSQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04410 447 FunFam Vacuolar cation/proton exchanger 273 429 - -
Pumo4g04410 447 Pfam Sodium/calcium exchanger protein 286 425 IPR004837 GO:0016020|GO:0055085
Pumo4g04410 447 Pfam Sodium/calcium exchanger protein 97 252 IPR004837 GO:0016020|GO:0055085
Pumo4g04410 447 NCBIfam calcium/proton exchanger 69 428 - -
Pumo4g04410 447 MobiDBLite consensus disorder prediction 1 31 - -
Pumo4g04410 447 Gene3D - 126 262 IPR044880 -
Pumo4g04410 447 Gene3D - 273 429 IPR044880 -
Pumo4g04410 447 FunFam Vacuolar cation/proton exchanger 126 265 - -
Pumo4g04410 447 NCBIfam calcium/proton exchanger 78 428 IPR004798 GO:0006816|GO:0015369
Pumo4g04410 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 433 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04410 Pumo-Chr4 85118928 85126962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04410 5 433 Antiporters AT3G13320 67.442 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04410 K07300 - gmx:100806000 752.281