Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04403 ATGGATAAAGTGTGTCTGAACAGTGAGCCGGTAGCAGATGAGGCTGTTGCTCCTGCCGTTGGAATGGAATTTGAGAGTTACGAGGATGTCTATTACTTCTATAATTGGTACGCCAAGGAACAGGGATTTGGGGTTAGGGTCACTAATACCTGGTACCGCAAGACTAAGGAACGTTACAGAGCCAAACTTAGCTGCAGCAGTGCAGGCTTCAAGAAAAGAACTGAAGCTAATCGCCCCAGACCCGAAACCAGAACCGGTTGTCCTGCTATGATCAAGTTCAGGTTGATGGACTCCACAAGATGGAGAATTATTGAAGTTGAGCTTGACCACAACCACTTGATTAACCCCACCAGTGGAAAGTTTTACAAGTCCCACAAGCAAATTGCTCTTGGGACCAAAAGAACCTTCCAGTTAGATGCTCCTCCTCACAAAATTAGGATGTTTCGAACTCTCATAATCGATGCTCACCATGTTGCTGAAGGCAAATCCCAAAACGGCCTCTACTCCAATCAGTTGAAGCTGAACAAAGGTCATGCTCAAGCCATTCTCAATTTTTTTAGTCACCACCAATTGGCAGACCCAGACTTCTTCTATGTGCTGGATGTCAATGAGAAGGGATGTTTGAGGAATTTGTTCTGGGCCGATGCTAAGTCCAGAGTCGCATACAGTTATTTTAGTGATGTTGTAGCAATTGATACTGCCTGTTTGACAGGTGAATATCAAGTTCCACTGGTTCTGTTCCTTGGGGTAAATCACCATAACCAATCCATCTTGTTTGGTTGTGGATTGCTTGCTGGTGGTACCATTGAATCATATACATGGCTGTTCAGGGCGTGGCTTACGTGTATCTTAGGACGCCCCCCACAAGTTATCATTACGGACCAATGTGGAATCTTGCAAACTGTGGTTGCTGATGTCTTTCCAAGATCTACACACTGCCTTTGCTTGTTTAGTATCATGCAAAAAATTCCAGAAAATCTGGGAGCCTGCATTGAATATGAAGCAATCAATGCAGCTTTGAGCAGAGCAGTTTATTCCTCTCTGAGGGCTGAGGAATTTGAAGCAACTTGGGAGGACATGATGAAAAGCAACGAAACTAGAGGCAATAAATGGCTTCAATCTTTATATGAGGATCGGAAACGCTGGGCTCCAGTTTATCTGAAGGAAATCTTCTTGGCAGGAATGTTTCCAATTCAACCGAGTGATGTTGTACCATTTTTCTTTGATGGGTACCTCAATGAACAAACTTCTCTAAAAGAATTTTTAGAAAAATATGATCAGACTTTACAGACAAAGCAACAACTTGAGGCTTTGGCAGATTTGGACTCAAAATCTTCTAGCTTTGTGCCAAAATCAAGGTCTTACTTTGAGTTGCAGGTTTCAAAGTTATACACCAATGAAATATTAAGAATGTTTGAAAGGGAAGTGGAAGGGATGTTTTCTTGCTTTAACTCCAGACAGATAAATGTTGACGGACCAGTCATCACATACATTGTCCAGGAACAAGTTGAAGCTGAGGGAAATCAGAGAGATGCAAGAGATTACGAGGTGTGTTATAATGAAGCTGAAATGGAGGTCCTTTGCATCTGTGGTTTGTTCAATTTCAGAGGTTACTTGTGTAGGCATGCTTTATTTATCTTAAGCCAAAATGGGATAAAAGAGATCCCAGCTCAGTACATTCTTTCACGATGGAGAAAAGATATGAAGCGTAGCAATGTTTATGATCACAACGGTAGTGGCATTGATATTAGTAATCCAGTTCATAGGTATGACCATTTATACAGACAGATTGTGAAGGTTGTAGAGGAAGGTAAGAAATCTCATGATCATTACAGGACTGCAGTACAAGCATTGGAGAATATATTGAGCAAGCTTCATCTTGTAAACGTTGAGGATCCCAATATAATGTACAAGTATTGA 1920 0.4151 MDKVCLNSEPVADEAVAPAVGMEFESYEDVYYFYNWYAKEQGFGVRVTNTWYRKTKERYRAKLSCSSAGFKKRTEANRPRPETRTGCPAMIKFRLMDSTRWRIIEVELDHNHLINPTSGKFYKSHKQIALGTKRTFQLDAPPHKIRMFRTLIIDAHHVAEGKSQNGLYSNQLKLNKGHAQAILNFFSHHQLADPDFFYVLDVNEKGCLRNLFWADAKSRVAYSYFSDVVAIDTACLTGEYQVPLVLFLGVNHHNQSILFGCGLLAGGTIESYTWLFRAWLTCILGRPPQVIITDQCGILQTVVADVFPRSTHCLCLFSIMQKIPENLGACIEYEAINAALSRAVYSSLRAEEFEATWEDMMKSNETRGNKWLQSLYEDRKRWAPVYLKEIFLAGMFPIQPSDVVPFFFDGYLNEQTSLKEFLEKYDQTLQTKQQLEALADLDSKSSSFVPKSRSYFELQVSKLYTNEILRMFEREVEGMFSCFNSRQINVDGPVITYIVQEQVEAEGNQRDARDYEVCYNEAEMEVLCICGLFNFRGYLCRHALFILSQNGIKEIPAQYILSRWRKDMKRSNVYDHNGSGIDISNPVHRYDHLYRQIVKVVEEGKKSHDHYRTAVQALENILSKLHLVNVEDPNIMYKY 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04403 639 ProSiteProfiles Zinc finger SWIM-type profile. 515 551 IPR007527 GO:0008270
Pumo4g04403 639 SMART 26again6 526 553 IPR006564 GO:0008270
Pumo4g04403 639 Pfam FAR1 DNA-binding domain 33 115 IPR004330 -
Pumo4g04403 639 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 626 IPR031052 GO:0006355
Pumo4g04403 639 Pfam MULE transposase domain 228 322 IPR018289 -
Pumo4g04403 639 Coils Coil 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04403 Pumo-Chr4 85061724 85064059 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo4g04403 MULE 9.3e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04403 - K17604 gmx:100796267 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04403 4 85061724 85064059 Pumo4g04403 4 85061724 85064059 ECH