Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04400 ATGGGCCCATCTATTCCATCAGAACCGGTGCTTCCACTCTCATTGTTCTCAACTCTGCCCACCTTGCTAAGGAGGCAATGGTCACCAGATTTTCATCAATTTCAACAAGGAAGCTATCAAATGCACTCAAGATTCTGCACTTCTGATAAATGTATGGTTGCCACAAGTGACTACAATCAATTTCACAAAACGGTCAAAAGGCATATTCTTACAAACTTTTCAGGAGCCAATGCACAGAAGCGACACCGTATCCACAGAGAAGCCATGATGGAAAATATTTTGAGGCAGTTTAGTGACCATGTGAAGACCTTCTCTGATTTGGCAGTTAATTTTAGGAAAATATTTGCGTCTGAACTTTTTGGATTAGCACTGAAGCAAGCTCTGGGAAGTAATGTAGAGTCCATTTATGTGGAGGAGCTTGGGAGTACATTATCAAAAGAGGGCATATATAAGATTCTGGTGGTTGATATAATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAAGTGGATTCCAAATAGGAGCATGGAGATGAAAATTCAGAACTTGTATGTCCGCAGAAAAGCTGTCATGAAGGCCTTGATGAATGAGCAGAAGAAGAGAATGGCTTCAGGAAAGGAACTTAATTGTTATTTTGATTACCTGGTATCCGAAGCTAAAGAACTGACTGAAGATCAAATTTCCATGCTAATCTGGGAGACCATTATCGAGACATCTGATACTACATTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAACTCGTCAGGACCGTCTTTATGAGGAGCTCAAATATGTATGTGGAGATGAAAATGTTATAGAAGACCAATTAGCTAAGCTACCTTACTTGGGGGCAGTATTCCATGAAACTTTAAGGAAGCATAGTCCAGCTCCGATTGTGCCACTAAGATATGTTCATGAAGATACACAATTGGGAGGATATCATATTCCTGCAGGAAGCGAGATCGCAATAAATATATATGGATGCAACATGGAGGAGAATAGGTGGGAAAATCCTCATGAGTGGATGCCTGAGAGATTTCTTGACGAGAAATATGACCCCATGGATCTATACAAGACCATGGCCTTTGGAGCAGGGAAGAGGGTGTGTGCAGGCTCTCTTCAGGCCATGTTGATAGCTTGCACTGCAATTGGCAGATTGGTTCAGCAATTTGAGTGGGAGCTCGGACAAGGGGAGGAAGAGAATGTGGATACACTGGGCCTTACCACCCACAGGCTCCATCCCCTCCTAGTAAAACTCAACCCAAGAAATCAATAG 1305 0.4222 MGPSIPSEPVLPLSLFSTLPTLLRRQWSPDFHQFQQGSYQMHSRFCTSDKCMVATSDYNQFHKTVKRHILTNFSGANAQKRHRIHREAMMENILRQFSDHVKTFSDLAVNFRKIFASELFGLALKQALGSNVESIYVEELGSTLSKEGIYKILVVDIMEGAIEVDWRDFFPYLKWIPNRSMEMKIQNLYVRRKAVMKALMNEQKKRMASGKELNCYFDYLVSEAKELTEDQISMLIWETIIETSDTTLVTTEWAMYELAKDKTRQDRLYEELKYVCGDENVIEDQLAKLPYLGAVFHETLRKHSPAPIVPLRYVHEDTQLGGYHIPAGSEIAINIYGCNMEENRWENPHEWMPERFLDEKYDPMDLYKTMAFGAGKRVCAGSLQAMLIACTAIGRLVQQFEWELGQGEEENVDTLGLTTHRLHPLLVKLNPRNQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04400 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Pumo4g04400 434 Pfam Cytochrome P450 49 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 Gene3D Cytochrome P450 8 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 SUPERFAMILY Cytochrome P450 20 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g04400 434 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 44 433 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Pumo4g04400 434 CDD CYP77_89 43 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04400 Pumo-Chr4 85045891 85048698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04400 47 432 Cytochrome P450 AT5G25900 64.083 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04400 K04122 - gmx:100802970 740.339