Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04394 ATGGCAGATCTCAAGGAGAGGCTACTACCACCGAAACCTGCATCAGCTCTTAACGTAAGAGAGGCTGCCAATCGACCATCTGCCTCTGGAAGGCAAGCTTTCCAAGGGGTGGATGTTCTGGGGCTAAAGAAGCGAGGCCAAGGTCTCCGGTCATGGATTCGTGTTGACACATCTGGAAACTCTCAGGCCATTGAGGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCTGCACGTGATCTGCGCCTACTTGATCCTCTGTTTGTCTACCCATCAACAATCCTTGGTAGGGAAAAAGCTATTGTTGTAAATTTAGAACAGATACGGTGTATTATTACTGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCACTATGTAATGGAACTACAACGACGGTTGACAACAACTGGGGTAGGGGAGGTTTGGCAATCAGACAGTTCTGACATGAACCGAAGGAGAGGAAGTAGGAATTTTGAAAATGTATTTAGCAACTCTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCCTGGAGGCGGCATGCACATTTCTTGATTCCCAGGCAGCAGAGTTAGAAATAGAGGCTTATCCATTGTTGGATGAACTGACATCAAAGATCAGTACACTAAATTTGGAACGTGTTCGTCGGTTGAAGAGCAGACTTGTTGCCTTGACTAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGACGATGATGGTGATATGGCCGAAATGTATCTTACTGAGAAGAAAAGGCGAATGGAGTTGTCATTTTATGGAGATCAGTCTATGGTTGGATATAAATCAGTTGATGGTGCATCCATTTCTGCTCCGGTCTCTCCTGTTTCATCACCTCCTGATTCTCGGAAGCTTGAAAAGAGCTTCAGCATTGCTAGGAGTCGACATGAGAGCATGAGGAGTTCTGAAAGTACTACGGAAAGTATAGAGGAGCTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGACAGCACTCTAAATAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTGGATAATGTGCGAAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTGGTTGCCATCTTTGGAGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTGAATTATTTGATGTCCCTTCTGCTTTCCAGTGGGTCCTTATAATAACAGGAGTTTGTGGAGTCTTCATATTTTCTGCATTTGTGTGGTTCTTCAAGTACAGAAGACTTATGCCCCTATAG 1332 0.4302 MADLKERLLPPKPASALNVREAANRPSASGRQAFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGVGEVWQSDSSDMNRRRGSRNFENVFSNSSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPDSRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIELFDVPSAFQWVLIITGVCGVFIFSAFVWFFKYRRLMPL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04394 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 20 441 IPR039204 -
Pumo4g04394 443 FunFam Magnesium transporter MRS2-1 381 441 - -
Pumo4g04394 443 FunFam Magnesium transporter MRS2-1 40 123 - -
Pumo4g04394 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Pumo4g04394 443 Gene3D - 40 123 - -
Pumo4g04394 443 Coils Coil 224 251 - -
Pumo4g04394 443 Gene3D Magnesium transport protein CorA, transmembrane region 130 374 - -
Pumo4g04394 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Pumo4g04394 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04394 Pumo-Chr4 84983443 84988216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04394 1 443 MRS2 Gene Family AT1G16010 86.036 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04394 K16075 - gmx:100801387 790.415