Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04379 ATGCCTTCTGCAGAATCATCATCATCATCAGCTTGCTCCGAAACCATTTGTGTGACCGGCGCCGGTGGCTTCATCGCCTCTTGGATGGTCAAACTCCTCTTGGAGAAAGGCTACACTGTCCGAGGAACCCTCAGAAACCCAGATGATCCCAAGAACGGCCACTTGAAAGAGCTCGAAGGAGCCTCCGAGAGGCTAACACTGCATAAGGTTGACCTCCTTGATCTTCAATCCGTTAGATCAGTTATTAACGGCTGTCATGGTGTCTTTCACACTGCTTCTCCTGTCACCGATAACCCCGAAGAAATGGTGGAGCCAGCGGTGAGTGGAGCTAAGAATGTGATCATAGCAGCTGCAGAAGCAAAAGTGCGACGTGTGGTGTTCACCTCATCAATTGGTGCCGTCTATATGGACCCCAATAGGAGCATCGATTTGGTGGTTGACGAGTCCTGTTGGAGTGATTTAGAATATTGCAAGAACACCAAGAATTGGTACTGCTATGGGAAAGCTGTGGCTGAACAAGCAGCATGGGAGACAGCAAAAGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTTCTTGGACCATTACTACAACCCACCATCAATGCTAGTACAATTCACATCCTCAAGTACCTCACCGGCTCTGCTAAAACCTATGCAAATGCCACACAGGCTTATGTGCATGTTAGGGATGTGGCATTGGCCCACATACTTGTTTATGAGAAGCCTTCTGCTTCTGGTAGATACTTATGTGCCGAAAGCTCCCTGCACCGTGGAGAATTAGTTCAAATTCTCGCCAAGTATTTCCCGGACTACCCAGTTCCCACCAAGTGTTCAGATGAAAAGAATCCGAGAGCAAAACCCTACACATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCAGTGTCTATATGAAACCGTTAAGAGCCTGCAGGAGAAAGGCCACCTTTCTGTTCCTGCAAAGCAGCAGGAAGATTCAACTACCGTGAAATCCTAA 1023 0.4751 MPSAESSSSSACSETICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKELEGASERLTLHKVDLLDLQSVRSVINGCHGVFHTASPVTDNPEEMVEPAVSGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRSIDLVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWETAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVQILAKYFPDYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLSVPAKQQEDSTTVKS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04379 340 CDD FR_SDR_e 17 303 - -
Pumo4g04379 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 320 IPR036291 -
Pumo4g04379 340 Gene3D - 5 340 - -
Pumo4g04379 340 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 316 - -
Pumo4g04379 340 Pfam NAD dependent epimerase/dehydratase family 16 247 IPR001509 -
Pumo4g04379 340 FunFam Cinnamoyl-CoA reductase 1 7 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04379 Pumo-Chr4 84819414 84822068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04379 16 279 Monolignol Biosynthesis Gene Families AT1G80820 75.758 7.01e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04379 K09753 - gmx:100789070 632.484