Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04370 ATGAATCTTATTGTTCTGTTCCTGCCTATTTGGGTGCTAAGCATTTCTCTTTCCTCACCAATTCTTCATGCTGCATCCTCCATTTCTGTTTCTCAAAATGCACAAGCTGAATCTCCAGAAATTCAGGAGGTTAGAACAGTGCACCACCAGATTTTGGATAAGAGAATTCTAATCGCACTAGTTGCTTGTTCTGCTCTTCTTGGTGGAGTCTTCCTATTCTTGTTATATCTCTGGTTCCGTCGACATAAAAACTTAAGATGCTCCAGAAGTAAAAGCCAAGAAACCATTGAGGCTGCAAAAGGGGAAACCTTAAGCTCGGTTAATGCTAAACTAAACTACTCTAGGATGGCAGATAAGAAGAGTTCAGTTGCTATTTTTGACTATCAGCTGTTAGAGGCTGCTACAAACAGCTTTAGCACAAGTAATATTATGGGAGAGAGTGGTTCTAGAATCGTTTACAGAGCTCGTTTTGATGAACATTTCCAGGCAGCTGTGAAGAAAGCAGAAAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTTGTTGAGCAAGATACGGCATCAGAATATCATAAAACTTATGGGTTATTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAATTGATGGACAATGGATCTCTGGAAATTCAATTGCATGGGCCTAATCGGGGGTCGTGTTTAACTTGGCATCTCAGGTTAAGAATTGCTGTTGATGTTGCCAGAGCATTAGAATATCTCCACGAGCACAACAATCCTCCTGTGGTTCATAGAGACCTAAAATCTTCTAATGTTCTTCTGGATTCTAGCTTTAATGCCAAGTTATCAGATTTTGGATTTGCTATGGTTTCGGGAATGCAACACAAGAACATGAAGATGTCAGGAACTTTAGGATATGTGGCCCCCGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTCTATGCTTTTGGGGTTGTCCTTCTAGAACTCCTAACCGGGAAAAAACCCATGGAGAGCATGACCTCGAACCAATATCAATCCCTTGTATCATGGGCCATGCCTCAGCTAACTGACAGATCGAAGCTTCCAAGTATTCTGGATCCTGTTATCAGAGACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTCTGTGTGCAAGCAGAACCAAGTTATAGGCCACTAATAACAGACGTGCTGCACTCTCTTATCCCTTTGGTACCCGTTGAGCTTGGAGGGTCACTAAGAGTTACAGAACCAATCAGCTCAGAGAACTCTCATTGA 1287 0.4134 MNLIVLFLPIWVLSISLSSPILHAASSISVSQNAQAESPEIQEVRTVHHQILDKRILIALVACSALLGGVFLFLLYLWFRRHKNLRCSRSKSQETIEAAKGETLSSVNAKLNYSRMADKKSSVAIFDYQLLEAATNSFSTSNIMGESGSRIVYRARFDEHFQAAVKKAESDADREFENEVSLLSKIRHQNIIKLMGYCIHGESRFLVYELMDNGSLEIQLHGPNRGSCLTWHLRLRIAVDVARALEYLHEHNNPPVVHRDLKSSNVLLDSSFNAKLSDFGFAMVSGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMESMTSNQYQSLVSWAMPQLTDRSKLPSILDPVIRDTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSENSH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04370 428 Gene3D Phosphorylase Kinase; domain 1 98 210 - -
Pumo4g04370 428 PANTHER OS01G0750732 PROTEIN 32 408 - -
Pumo4g04370 428 ProSiteProfiles Protein kinase domain profile. 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04370 428 Gene3D Transferase(Phosphotransferase) domain 1 211 409 - -
Pumo4g04370 428 SUPERFAMILY Protein kinase-like (PK-like) 114 404 IPR011009 -
Pumo4g04370 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Pumo4g04370 428 FunFam probable receptor-like protein kinase At1g80640 211 409 - -
Pumo4g04370 428 Pfam Protein kinase domain 142 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04370 428 SMART serkin_6 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04370 Pumo-Chr4 84726126 84730210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04370 1 350 Receptor kinase-like Gene Family AT1G80640 46.341 3.46e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pumo4g04370 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04370 - - gmx:100811188 778.089