LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g04354	ATGGGGCCCAATCACGGTTCTGGGATACCTGGGGCTGTTTTCAATTTAACAACCACAGTTATTGGGGCAGGGATTATGGCTCTCCCTGCCACTATGAAGGTTCTGGGAGTGGTTTTGGGGATTATATTGATAATTATTATGGGAATTTTGTCTGAAATTAGTGTCGAATTGTTGGTCAGGTTTTCTGTTTTGTGTAAGGCATCCTCCTATGGGGAGGTTGTTCAGCATGCTATGGGAAGGCCTGCCAGGATTTTGTCTGAAATTTGTATTATTGTGAACAATGGTGGTGTTTTGGTCGTTTACTTGATAATCCTGGGGGATGTTATGTCTGGTTCCGTTCACCATTTGGGGGTTTTTGATCAGTTAATGGGGAACGGGGTGTGGGATCAGAGGAAGCTTGTGATTCTTGTTGTCATGGTGGTTTTCCTTGCTCCCCTTTGTTCACTTGACAAGATTGATTCCTTGAGCTTGACCTCCGCTGCATCGGTGGCTCTTGCTATCTTGTTTGTCATTGTTACTTTTACTGTTGCTTTCATTAAGCTCGTGGAAGGACGGGTTGATCCTCCCAGGATGGCTCCTGATTTTAGCTCCAAAACTGCCATCTTGGATTTGCTTGTTGTGATTCCCATCATGACCAATGCATTTGTTTGCCATTTTAATGTGCAGCCCATATATAACGAGCTTGAACAGCCGTCTCCTCAGAAGATGAACCGAGTTGGAAGGTACACCACACTTTTGTGCATCCTAGTTTATGCTTCCACTGCCATATCGGGTTACCTGCTCTTTGGGAAAGATACCGAGTCTGATGTGCTCACTAATTTTGATAAGGATCTTGGAATTCGGTTCAGCTCGGTCTTGAACTATATTGTCCGGGTTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTTATTCATTTCTCACTGCGCCAAACAGTGGATGCCTTAGTGTTTGAGGGATCACCTCCTCTATCAGAAAGTAGGAAGAGATCTCTGGGGTTGACTGTGGTTCTGTTGGTCCTCATATATATTGGGTCTACTATGATTCCAAGCATATGGACAGCTTTTAAGTTCACTGGGGCAACCACAGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTTCTTTGAGATTAAGTCATATAGGGGATTTAAGCTATGGGGAATGGATTTTATCTTGGTTGATGTTGGTATTGGCTGTGACTGTTAGCATAGTAGGAGTTGTTGGCAATATCTATAGCCTTGAGAGTAAGTCTTAG	1260	0.4325	MGPNHGSGIPGAVFNLTTTVIGAGIMALPATMKVLGVVLGIILIIIMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPARILSEICIIVNNGGVLVVYLIILGDVMSGSVHHLGVFDQLMGNGVWDQRKLVILVVMVVFLAPLCSLDKIDSLSLTSAASVALAILFVIVTFTVAFIKLVEGRVDPPRMAPDFSSKTAILDLLVVIPIMTNAFVCHFNVQPIYNELEQPSPQKMNRVGRYTTLLCILVYASTAISGYLLFGKDTESDVLTNFDKDLGIRFSSVLNYIVRVGYILHLILVFPVIHFSLRQTVDALVFEGSPPLSESRKRSLGLTVVLLVLIYIGSTMIPSIWTAFKFTGATTAVSLGFIFPSLVSLRLSHIGDLSYGEWILSWLMLVLAVTVSIVGVVGNIYSLESKS	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g04354	419	PANTHER	AMINO ACID TRANSPORTER	4	403	-	-
	Pumo4g04354	419	Pfam	Transmembrane amino acid transporter protein	7	410	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo4g04354	Pumo-Chr4	84553165	84555318	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo4g04354	4	419	Amino Acid or Auxin Permease AAAP Family	AT1G80510	78.417	0.0	639

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g04354	-		-	gmx:100791860	752.281