Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo4g04323 | ATGGTTGGATCTGCGAACATAAACCAGAGATCAATGGATGGTGCGAGAGACTGTGAGATTGCGATGGGTGGTTATCAACCATTTAATTTGGGTACGAAGCAGGCTGCAAGGGGACAGATACATAGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTTGATAACTCCTTGCTGCACCCTGAAAGCTTAGAATGTATTAAGAAGGTGAACGAGATTGCGGACAAGTATTGGGATCTCTATAATACTGAGCCACTTGAGCAAGACCTTCCTGGCCACCTGCTCCGCTATCCTATTGCGGTTTCCATCGAAGGAAGTGTGACACAACTGCAAGGATTTCAATTCTTCCCTGACACCAAAGCTCCTATTCTTGGGGCCAAATCTGACTACATGCCACCAATCCTTACTACTTAA | 417 | 0.4604 | MVGSANINQRSMDGARDCEIAMGGYQPFNLGTKQAARGQIHSFRMSLWYEHLGMLDNSLLHPESLECIKKVNEIADKYWDLYNTEPLEQDLPGHLLRYPIAVSIEGSVTQLQGFQFFPDTKAPILGAKSDYMPPILTT | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo4g04323 | 138 | Pfam | Phospholipase D C terminal | 56 | 128 | IPR024632 | - | |
| Pumo4g04323 | 138 | PANTHER | PHOSPHOLIPASE D | 2 | 126 | IPR015679 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo4g04323 | Pumo-Chr4 | 84234941 | 84235357 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo4g04323 | 1 | 138 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 75.362 | 7.61e-73 | 230 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo4g04323 | K01115 | - | qsu:112037256 | 234.187 |