Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04322 ATGGAGGAGACTGTTGGTATTGGGAAAGGAATTACTAAACTATATGCAACCATTGATTTAGAAAAGGCACGCGTGGGAAGGACTAGAATTATAGAAAAGGACACAAATCCTAAATGGAACGAGTCTTTTCACATTTATTGTGCTCATATGGCATCACATATCATATTCACAGTGAAAGATGACAATCCTATTGGTGCAACCTTAATTGGAAGAGCATATTTGCCCGTTGAGGAGATCTTGGATGGCAAAGAAATAGATAGATGGGTTGAAATATTGGATGAGCATAAAAAACCAATACATTCACATTCCAAGATCCACGTGAAGCTGCAATACTTGGATGTTTCAAAAGACCCGAACTGTGGCCAAGGCATTAGTAGTCCTGAATTCCCTGGAGTTCCTTACACTTACTTCTCACAAAGACAAGGGTGTAAGGTTTCTCTGTACCAAGATACTCATGTCCCAGACAACTTTATTGTTCCTAAAATACCACTTGCTGGAGGCCACACTTACCAACCTCATAGATGTTGGGAAGATGTTTTTGATGCAATCAATAATGCACAACACTTAATATACATTACAGGATGGTCCGTTTACACTGAGATTACGTTAGTAAGAGATTCTAGGAGGCCAAAGCCTGGAGGAGATGCAACACTTGGTGAGCTTCTTAAGAAAAAAGCACGTGATGGTGTCAGGGTTTTGATGCTTGTTTGGGATGATAGAACTTCGGTTCCTTTGTTAAAAGAAGATGGCTTGATGGCTACTCATGATGAAGACACTGGGGACTACTTCTATGACAGTGAAGTGCACTGTGTTTTATGCCCTCGCAATCCTGATGATGGAGGAAGCGTTGTTCAGGACATAGAAATTTTCTCCATGTTTACTCATCATCAGAAAATTGTGGTAGTGGACAGTGCTTTGCCGAATGGAAGATCAGATAAGAGAAGAATTGTGAGTTTTGTTGGGGGTATTGATCTTTGTGATGGAAGATATGACACTCAATTCCATTCACTTTTCAGAACCTTGGGCACAGCACATCATGATGATTTTCATCAACCTAATTTTAAACATACTTCGATAAAAAAAGGTGGTCCAAGGGAACCTTGGCATGACATTCACTCTCGGCTTGAAGGGCCTATTGCATGGGATGTTTTGTTCAACTTTGAGCAAAGATGGAGGAAGCAAGGTGGAAAGGACTTACTGATTCCACTTAAAGACCTTGAAGATGTGATTATTCCCCCATCAGTAGTAACTTACCCTGAAGATCACGAGACATGGAACGTTCAGTTATTTAGATCCATTGATGGTGGAGCTGCTTTTGGGTTCCCAGAGACTCCTGAAGAAGCAGCTAGATCTGGACTCATTAGTGGGAAGGATAATATAATAGACCGTGGCATTCAAGATGCTTATATTAATGCCATTCGACGTGCCAAACATTTCATCTACATTGAGAACCAGTATTTCCTTGGAAGTTGTTATGCTTGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATCCCGAGGGAGCTTTCACTTAAGATTGTTAGTAAGATTGAAGCCGGGGAAAGGTTCAGTGTGTATATTGTGGTTCCAATGTGGCCAGAGGGTTATCCAGAAAAAGGGACGGTTCAGGCAATATTGGACTGGCAGAGGAGAACAATGGATATGATGTACAGGGATGTTGTTGGAGCACTAAAAGCCAAGGGTATTCAGGAAGATCCTCGCAACTATTTGACATGCTTCTGCCTCGGTAATCGAGAGCTGAAGAAACAAGGAGAGTACGAGCCTCCAGAAAGACCAGATCCTGATACAGATTATATGAGAGCACAAGAGTCCCGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGACGATGAATACATAATGGTTGGATCTGCGAACATAAACCAGAGATCAATGGATGGTGCGAGAGACTCTGAGGTTGCTATGGGTGCTTATCAACCCTATCATTTGGGTACGAAGCAGCCTGCAAGGGGTGAGATCCATGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGGTTGCTTCATGACTCCTTCCTCCACCCTGAAAGCTTAGAATGTATTAAGAAGGTGAACGAGATTGCGGACAAGTATTGGGATCTCTATACTAGTGAGCCACTTGAGCAAGACCTTCCTGGCCACCTGCTCCGCTATCCTATTGCGATTTCCAGCGAAGGAAGTGTGACGCAACTGCAAGGGTTTGAATTCTTCCCTGATACCAAAGCTCCTATTCTCGGGGCCAAATCTGACTACATGCCACCAATCCTTACTACTTAA 2322 0.4272 MEETVGIGKGITKLYATIDLEKARVGRTRIIEKDTNPKWNESFHIYCAHMASHIIFTVKDDNPIGATLIGRAYLPVEEILDGKEIDRWVEILDEHKKPIHSHSKIHVKLQYLDVSKDPNCGQGISSPEFPGVPYTYFSQRQGCKVSLYQDTHVPDNFIVPKIPLAGGHTYQPHRCWEDVFDAINNAQHLIYITGWSVYTEITLVRDSRRPKPGGDATLGELLKKKARDGVRVLMLVWDDRTSVPLLKEDGLMATHDEDTGDYFYDSEVHCVLCPRNPDDGGSVVQDIEIFSMFTHHQKIVVVDSALPNGRSDKRRIVSFVGGIDLCDGRYDTQFHSLFRTLGTAHHDDFHQPNFKHTSIKKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLIPLKDLEDVIIPPSVVTYPEDHETWNVQLFRSIDGGAAFGFPETPEEAARSGLISGKDNIIDRGIQDAYINAIRRAKHFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPRELSLKIVSKIEAGERFSVYIVVPMWPEGYPEKGTVQAILDWQRRTMDMMYRDVVGALKAKGIQEDPRNYLTCFCLGNRELKKQGEYEPPERPDPDTDYMRAQESRRFMIYVHAKMMIVDDEYIMVGSANINQRSMDGARDSEVAMGAYQPYHLGTKQPARGEIHGFRMSLWYEHLGLLHDSFLHPESLECIKKVNEIADKYWDLYTSEPLEQDLPGHLLRYPIAISSEGSVTQLQGFEFFPDTKAPILGAKSDYMPPILTT 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04322 773 SUPERFAMILY Phospholipase D/nuclease 413 703 - -
Pumo4g04322 773 SUPERFAMILY Phospholipase D/nuclease 121 412 - -
Pumo4g04322 773 Gene3D C2 domain 3 121 IPR035892 -
Pumo4g04322 773 Pfam Phospholipase D C terminal 692 763 IPR024632 -
Pumo4g04322 773 Pfam PLD-like domain 529 655 IPR025202 -
Pumo4g04322 773 PIRSF PLD_plant 2 773 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pumo4g04322 773 Gene3D Endonuclease Chain A 165 406 - -
Pumo4g04322 773 ProSiteProfiles C2 domain profile. 1 89 IPR000008 -
Pumo4g04322 773 CDD C2_plant_PLD 8 112 - -
Pumo4g04322 773 SMART C2_3c 1 88 IPR000008 -
Pumo4g04322 773 Gene3D Endonuclease Chain A 447 662 - -
Pumo4g04322 773 Pfam C2 domain 9 91 IPR000008 -
Pumo4g04322 773 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 114 IPR035892 -
Pumo4g04322 773 FunFam Phospholipase D 432 665 - -
Pumo4g04322 773 FunFam Phospholipase D delta 166 409 - -
Pumo4g04322 773 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 291 329 IPR001736 GO:0003824
Pumo4g04322 773 PANTHER PHOSPHOLIPASE D 13 761 IPR015679 -
Pumo4g04322 773 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 619 646 IPR001736 GO:0003824
Pumo4g04322 773 Pfam Phospholipase D Active site motif 292 329 IPR001736 GO:0003824
Pumo4g04322 773 SMART pld_4 291 329 IPR001736 GO:0003824
Pumo4g04322 773 SMART pld_4 619 646 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04322 Pumo-Chr4 84232653 84253355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04322 1 773 Phospholipase D Gene Family (Wang group) AT3G15730 76.903 0.0 1283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04322 K01115 - gmx:100784434 1389.79