Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04257 ATGGGTGTTAACTCTAACAGAGTGGAACACTTTGATAGCCATGAAACCACCATCAAAATCCAAGACGAGACAACAACAGCACCAATGCCATCATTGCATATCCATGCAGTGCAGTTGCCACCACACCGAACCACACTCCACAAACTCAGACACAGAGTCTCCGAAATCTTCTTCCCAGATGACCCTCTCTACCGTTTCAAGAACCAAACTTGCTTCAAAAAGTTCCTTCTCGCGCTTCAGTATTTGTTCCCCATTTTCCACTGGGCCCCTAACTACAGCCTCACCCTTCTCCGCTCTGACCTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATCAGTTATGCCAAGCTTGCAAACTTGCCACCCATTCTTGGATTGTATTCAAGTTTTGTGCCTCCATTGATATACTCGCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCAATTGCGTCTTTGGTTATGGGATCAATGTTAAGTGAGAAAATTTCTTACACTCAAGAACCTATTCTCTATCTGGGATTAGCTTTCAGTGCCACTTTCTTTGCTGGTGTATTCCAAGCTTCTCTGGGTATATTAAGGTTAGGCTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACGGGCGGTGCTGCCATTATTGTGTCACTGCAGCAGCTGAAAGGTTTACTTGGAATAGTGCACTTTACCAGCAAGATGCAAATAATTCCTGTTATGATCTCTGTTTTCAAGCAAAGACATGAGTGGTCATGGCAAACCATTCTTTTGGGATTCGGCTTCCTGGCCTTCTTGCTGACAACAAGGCACATTAGCTTGAGGAAACCGAAACTGTTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTAGTCTTTCTTCTGAGGAATAAGACTCAACAAATTTCAGTTATCGGGCACTTACCAAAGGGAGTTAATCCACCATCATCAAACTTGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATCATCACAGGGATCTTATCTCTCACTGAAGGAATTGCGGTAGGTAGAACATTTGCATCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTAATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTTACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCCGGAGCACAGACAACTGTTTCAAATATAATCATGGCTGCAGCTGTTCTAGTGACCCTTCTGTTTCTCATGCCTCTTTTCTACTATACACCAAATGTTGTCTTAGCGGCCATTATCATCACTGCTGTGATTGGGCTAATAGATTATCAATCTGCATACAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGTTTGTGCTCCTTTTTTGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGTATAGCGGTTGTCATATCAGTCTTCAAGATCTTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTCCACAACATAAACCAATACAAAGAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAACTCAACTTATCTTCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCATATAAAAGCTAATAATGGAGCTCCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGGCTTGACACATTATGTGAACTTAGAAAGATGCTGGAGAAGAGATCGCTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAATTGCACAAGTCAAAAATTTTGGACTCTTTTGGATTAAAAGGAGTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCGCTCTGGAAAGCTCAGCCTTGA 1980 0.4247 MGVNSNRVEHFDSHETTIKIQDETTTAPMPSLHIHAVQLPPHRTTLHKLRHRVSEIFFPDDPLYRFKNQTCFKKFLLALQYLFPIFHWAPNYSLTLLRSDLISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEKISYTQEPILYLGLAFSATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFTSKMQIIPVMISVFKQRHEWSWQTILLGFGFLAFLLTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNKTQQISVIGHLPKGVNPPSSNLLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVVISVFKILLHVTRPNTLVLGNIPGTQIFHNINQYKEALRVPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGAPLKCIILDMTAVTAIDTSGLDTLCELRKMLEKRSLQLVLANPVGNVMEKLHKSKILDSFGLKGVYLTVGEAVADISSLWKAQP 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04257 659 Pfam Sulfate permease family 97 476 IPR011547 GO:0016020
Pumo4g04257 659 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Pumo4g04257 659 SUPERFAMILY SpoIIaa-like 534 650 IPR036513 -
Pumo4g04257 659 NCBIfam sulfate permease 84 647 IPR001902 GO:0016020|GO:0055085
Pumo4g04257 659 Pfam STAS domain 529 647 IPR002645 -
Pumo4g04257 659 FunFam Sulfate transporter 31 508 653 - -
Pumo4g04257 659 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Pumo4g04257 659 PANTHER SULFATE TRANSPORTER 52 650 IPR001902 GO:0016020|GO:0055085
Pumo4g04257 659 Gene3D STAS domain 508 653 IPR036513 -
Pumo4g04257 659 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04257 Pumo-Chr4 83471716 83476804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04257 1 659 Inorganic Solute Cotransporters AT3G15990 75.794 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04257 K17471 - gmx:100812617 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04257 4 83471716 83476804 Pumo4g04257 4 83471716 83476804 ECH
Pumo4g04257 4 83471716 83476804 Pumo7g00203 7 2319447 2323762 PCT