Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04252 ATGAGCGTGGTTGGATTTGATTTTGGAAATGAGAGCTGCATTGTAGCTGTTGCAAGACAAAGGGGGATCGATGTTGTGCTCAATGATGAGTCCAAACGTGAAACACCTGCAGTTGTGTGCTTTGGTGACAAACAGCGGTTCCTTGGGACAGCTGGTGCTGCTTCTACTATGATGAACCCAAAGAATTCAATCTCACAGATAAAGAGGTTAATTGGTAGACAATTTGCTGATCCGGAACTGCAGCGAGATCTGAAGACTTTCCCTTTCCCTTGTGACCGAAGGACCTGA 288 0.4583 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFLGTAGAASTMMNPKNSISQIKRLIGRQFADPELQRDLKTFPFPCDRRT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04252 95 Pfam Hsp70 protein 3 90 IPR013126 GO:0005524|GO:0140662
Pumo4g04252 95 FunFam Heat shock 70 kDa protein 4 38 94 - -
Pumo4g04252 95 Gene3D - 38 91 - -
Pumo4g04252 95 PANTHER HSC70CB, ISOFORM G-RELATED 1 91 - -
Pumo4g04252 95 FunFam Heat shock 70 kDa protein 4 1 82 - -
Pumo4g04252 95 Gene3D - 5 37 - -
Pumo4g04252 95 SUPERFAMILY Actin-like ATPase domain 1 90 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04252 Pumo-Chr4 83445886 83446173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04252 4 89 Calmodulin-binding Proteins AT1G56410 38.372 1.37e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04252 K09489 - gmx:100778196 177.948