Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04250 ATGCCCAAGAAAATTCGAGATTACCTCTTCAAAATGAAAAGCCCTCGATTACCCTCTAAGAACTGGATTCTCTCTGGCTGCAAGCATCCTAGGACACCTTCCTTTGCCTTATACAGTGCTAGAAACGAAGCTCATCATGTTGTCAACAAGAACAAGGACGATGCAGCCACCCTAGCAGACGTTGACCGTTTCCTCTTGGAGAATTTCAAGTCTCTATACCTCAAAGACGACCAAGAAACCGAAACCACCAAAAGGGTCTTCGAAGATGATCAAAACCACGTGCTGGAAGAAACAACGCCACGTGATCTTCGTGGCTCCCCCCGATGCTTCTCGGGGTCACTCGTGGAGGATGCTTTCACAAGCACAACAATCAACACAAGTGACGAAGCAGGATCGGTCTCAACCATCAATGATATTTCATCTTCCAATTCTTATGTGGATCAAGCTCTTCCAGATAATAGCATTGCTCTATTGACGCACTCGACGAGCCCCTACGAGGACTTCAGGCGTTCCATGCAACAAATGGTGAACAACCATGAAAGCGTCGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTTGTTACCTTAACCTCAACGAGAAAAAATCGCACAAGTTCATTCTCAGTGCTTTCGTCGATCTCATCACCGTCATGCGTCGGAATCCCGAACCAGCTAATTCGGACAAGCCACGAAGCGTTCGAACCGTTAGGAGTTGGTCCGGAGTTAAGGAATCATAG 738 0.4688 MPKKIRDYLFKMKSPRLPSKNWILSGCKHPRTPSFALYSARNEAHHVVNKNKDDAATLADVDRFLLENFKSLYLKDDQETETTKRVFEDDQNHVLEETTPRDLRGSPRCFSGSLVEDAFTSTTINTSDEAGSVSTINDISSSNSYVDQALPDNSIALLTHSTSPYEDFRRSMQQMVNNHESVVDWDFMEELLFCYLNLNEKKSHKFILSAFVDLITVMRRNPEPANSDKPRSVRTVRSWSGVKES 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04250 245 ProSiteProfiles OVATE domain profile. 157 217 IPR006458 -
Pumo4g04250 245 MobiDBLite consensus disorder prediction 222 245 - -
Pumo4g04250 245 NCBIfam uncharacterized plant-specific domain TIGR01568 155 217 IPR006458 -
Pumo4g04250 245 Pfam Transcriptional repressor, ovate 161 216 IPR006458 -
Pumo4g04250 245 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 91 217 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04250 Pumo-Chr4 83420185 83421244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo4g04250 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04250 - - vum:124828607 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04250 4 83420185 83421244 Pumo4g04250 4 83420185 83421244 ECH
Pumo4g04250 4 83420185 83421244 Pumo7g00206 7 2353666 2354699 PCT