Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04243 ATGCCTGGTCGGCCTTTGGATATTCCACTCCCAGTTTGTTCCTCGGTGGTGAGAAAGGAATCATTGGACTACCCTTTGCTTGTTCCAAATGGTTCTTATGTCTACACTGCAAATGGCTGTGTGAGATGCAACTGCGATGCTACCAAAAACTACTGGAAATTATCATGTGAGCCATCCAAGCTTAGACCAACTAATTGGTCTACTTGCCCATATATGAAATGTGACAATTCAAGCAACATGTACATTGGTGACACCGTATATTCAAGTTCTCACAATCTTGCAATCTGTGCCTACGCTGGTTATGGAACTCAAACTATCTTCACAACTCTTTCAGCAGTGTCTATTCCTCCCGGCTTAGTGCACGCGCATGACAAGAAAAGCAGATGGTGGACATGGCTTATTGTGATAGCAGGAGTTATTGTTGTACTTATATTCGGCTACTTTTGCTGCATCATCTGGAGAAAATGCAAAATAGAAGATTATAATAGAAGGGAAACAATAGTTTGGAAGAAAAGATTCAACATCATTGAAGGTATAGCTCATGGGTTGATTTATCTCCATCATTTTTCAAGATTAAAAGTGATTCACCGGGATTTGAAGGCTAGCAACATATTACTTGATTATGAAATGAACCCAAAAATTAGTGATTTTGGCATGGCAGTAATATTAGATTCAGAAGTAGTAGAAGTGAAGACAAAAAGAATTGTTGGAACATATGGTTATATGTCTCCGGAGTATGTCATAAAAGGCATTATCTCAACAAAGACTGATGTGTTTAGCTATGGAGTCCTAATGCTTGAGATTGTAAGTGGGAAGAAAAATAATTGTCGCTATCAGTCTGATACTCTGATTACCCCCTCAACCTTATTGGATTTGCATGGCAACTCTGCAATGAAGGTAAAGGTGTTGAGTTAA 915 0.3891 MPGRPLDIPLPVCSSVVRKESLDYPLLVPNGSYVYTANGCVRCNCDATKNYWKLSCEPSKLRPTNWSTCPYMKCDNSSNMYIGDTVYSSSHNLAICAYAGYGTQTIFTTLSAVSIPPGLVHAHDKKSRWWTWLIVIAGVIVVLIFGYFCCIIWRKCKIEDYNRRETIVWKKRFNIIEGIAHGLIYLHHFSRLKVIHRDLKASNILLDYEMNPKISDFGMAVILDSEVVEVKTKRIVGTYGYMSPEYVIKGIISTKTDVFSYGVLMLEIVSGKKNNCRYQSDTLITPSTLLDLHGNSAMKVKVLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04243 304 ProSiteProfiles Protein kinase domain profile. 1 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04243 304 SUPERFAMILY Protein kinase-like (PK-like) 158 278 IPR011009 -
Pumo4g04243 304 Gene3D Transferase(Phosphotransferase) domain 1 157 297 - -
Pumo4g04243 304 SMART serkin_6 76 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04243 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pumo4g04243 304 Pfam Protein kinase domain 165 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04243 304 FunFam Os07g0541700 protein 156 238 - -
Pumo4g04243 304 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 168 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04243 Pumo-Chr4 83359754 83363446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04243 160 283 Receptor kinase-like Gene Family AT4G05200 60.484 3.61e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g04243 Pkinase 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04243 - - gmx:100811504 286.96