Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04237 ATGAAACCTATTTCACTTATAATTCCACATCACCCCTTGATCGGTCAACTGTATGGCACAGCCTCTGTCTCTTGTAGCAGTGACAACCCTGCACATGTCAGTGGATGCGAGCCTCAAAGGTTCTCAACCTGCAGGAACCAAGATGCCTATGTATCCACCGCCAACTTTAAGTATGGTAATATGTCCCAAGAAGGCTACAAGAATGAGGATTTCTACAAGCTTTCTTTTTATGATTGCGGCGTCAAGTGTTTTGCCTACTCCTCCACAGCCGATGACAACACCGGCTGTCAGATGTGGTATTCAGGGACCAAATTTGTCACGTCTTCTAAAGGCCTATCCATTTACTCCATAAACAATGCCTCTGACATACAAGGAAATTCTAAGGGCAATATGAGAAAGGTATGGATAGCAAGTGTGATTGTTGGAGCTCAACTGATACTTGTATCATCCTTCGTGTTCTATGTATTATGGAGGAAACGCAAAATAAAAGAAGAAGAAATATTGAAGCAAAAGAAGATATTATGTGAGATAGCAACACCTTCCCTTGTAAACATCAAACGCACAAGAAGTAATAAAATTGAAAACACAAACCATGGAATGCATAAGTTCAGGTTTGGAACCATTGAATCAGCAACTGATAATTTCTCTTCAACAAATAAGTTGGGTGAGGGAGGCTTTGGACCTGTCTACAAGGGAAAATTACTTGATGGTCGAGAAATAGCAATAAAGAGACTTTCTAGAAGCTCAAGGCAAGGGTTAGCCGAGTTTAAGAATGAGGTTAAATTAATTGCCAAATTCCAACACACTAACTTGGTCAAGCTCCTTGGTTTCTGCATTGAAAAAGAAGAAAGGATGTTGATCTACGAATATATGCCCAACAAAAGCTTGGACTTTTACCTTTTTGATTCCAACAATAATACTTTGTTGGATTGGAAGAGAAGACTTGTCATCATTCAAGGAATAGCACAAGGGCTTGTTTATCTACATACATATTCAAGACTAACAGTAATTCACAGGGATTTAAAGCCAAGTAACATTTTACTGGACTATGAAATGAATCCAAAGATATCTGATTTTGGTTTGGCAAGAATATTTGAGTTGAAAGAACCCAAAAAAAACACAAATAAGGTTGTTGGAACTTATGGTTACATGTCTCCTGAATATGCTTTAAATGGCATTGTCTCGACAAAAATTGACGTTTTTAGTTTTGGAGTATTGACGCTTGAGATTGTGAGTGGTATGAAGAATTCTAGTAATTGTGATTCGGACCATCCCATCAATCTCAAAGGACATGAATCATGGGTTGTTGATGAAGTGTTGAGATGTATTCATATCAGTCTTTTGTGTGTGCAAGATCGAGCCGATGATAGACCAACTATGTCAGATGTGGTATCTTTCCTATCAAGTGAGGCTATTCTGCTTGTTGAACCGAAGCAACCAACATTCTTCACTAATACTAGAGTGAATGAGCCTAGAAGTCCTATTGCTGGTGGAAGAAATGATTCTCTAAATACTGTAACAATTTCAACAATGAGTGGTAGATAA 1545 0.3832 MKPISLIIPHHPLIGQLYGTASVSCSSDNPAHVSGCEPQRFSTCRNQDAYVSTANFKYGNMSQEGYKNEDFYKLSFYDCGVKCFAYSSTADDNTGCQMWYSGTKFVTSSKGLSIYSINNASDIQGNSKGNMRKVWIASVIVGAQLILVSSFVFYVLWRKRKIKEEEILKQKKILCEIATPSLVNIKRTRSNKIENTNHGMHKFRFGTIESATDNFSSTNKLGEGGFGPVYKGKLLDGREIAIKRLSRSSRQGLAEFKNEVKLIAKFQHTNLVKLLGFCIEKEERMLIYEYMPNKSLDFYLFDSNNNTLLDWKRRLVIIQGIAQGLVYLHTYSRLTVIHRDLKPSNILLDYEMNPKISDFGLARIFELKEPKKNTNKVVGTYGYMSPEYALNGIVSTKIDVFSFGVLTLEIVSGMKNSSNCDSDHPINLKGHESWVVDEVLRCIHISLLCVQDRADDRPTMSDVVSFLSSEAILLVEPKQPTFFTNTRVNEPRSPIAGGRNDSLNTVTISTMSGR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04237 514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 181 290 - -
Pumo4g04237 514 Pfam Protein kinase domain 216 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04237 514 MobiDBLite consensus disorder prediction 498 514 - -
Pumo4g04237 514 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Pumo4g04237 514 ProSiteProfiles Protein kinase domain profile. 215 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04237 514 SMART serkin_6 215 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04237 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 336 348 IPR008271 GO:0004672|GO:0006468
Pumo4g04237 514 CDD STKc_IRAK 221 467 - -
Pumo4g04237 514 Gene3D Phosphorylase Kinase; domain 1 164 290 - -
Pumo4g04237 514 MobiDBLite consensus disorder prediction 493 514 - -
Pumo4g04237 514 Gene3D Transferase(Phosphotransferase) domain 1 291 475 - -
Pumo4g04237 514 SUPERFAMILY Protein kinase-like (PK-like) 197 487 IPR011009 -
Pumo4g04237 514 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 291 435 - -
Pumo4g04237 514 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04237 Pumo-Chr4 83309578 83312001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04237 185 498 Receptor kinase-like Gene Family AT4G05200 49.271 1.15e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g04237 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04237 - - lja:Lj3g3v0211990.1 481.87