Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04234 ATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCGGCGGGGGTGCACCACCAGCGCCAGTACTCCGATAACTTCCTCGACGGCTCATCCAACGGCAACCGGTGGCTCCAATCGGCTGGCCTTCAACACCTCCAATCCTCCTCCAATCAACTTCCTCCGCTTCAGGACTATAACTTGTACGGCGGCGGCGGTGGCGGTGCACAGGGAGGAAGAATGTACCGAAATGCGCCGAGGAGCTTTAACGGAGGAAATGAGTATTATATGGAGCCTTCCACGCCTCCCGGCGGTTACCGTGCTTCGATGCAGAAAAAGAATGGCGAAGATTTGTCCGGTGATTTCAGCCCCGGCTTGTTGGATCTGCATTCGTTTGACACCGAGCTTCTTCCTCCTGAGATGCCAGCCTCCAATGCATATGATGCCAACTCCCTGTATCAACCTGGCCGGGGTAGAAGCTTTGATGACTCTGAACCTTACATGCTGAGCAAACAAACTGGCAGAGCTCGTGCTCCTGAAAACATATTGAAAAGTTTCCCTGCAGACAAAGAGAAATCTAATTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAAAGACCAATGAATAAGAAGGAATTAGCAAAAAATGAGGAAGACATCATAGAAACATATTCCAATTCTTTAACAGTGCACGAGACTAAACTGAAGGTTGACCTAACTCAGTATGTAGAAAAGCATGAATTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACGAATGATGAGGTGTATCGTGAAACAGTAGAGCCCATAGTTCCAATAATATTTGAACGCACTAAGGCAACTTGCTTTGCATACGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCATTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACAGGAACCAGGGGTTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAGCTCTATGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGAGTATCAGATGTGGAGAACATCAAAGACCTGATTGAGAAAGGAAATTCCACAAGAAGTACAGGCACCACGGGTGCAAATGAGGAATCATCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCCCCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACTGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGACAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAACTCCCGCACCGTTATGATATCATGCATATCACCAAGCACTGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCGAAAGGGAACAATTCGAAGAAGGAAGTTTTATCGTCAAATTTCAACCTTAAAGAATCAAGTACAGTTCCCTTATCTTCTGTTACCGGGTCAGCCTATGAGGATCGCATGACAGATGGATGGCCTGATGAAAATGAAGGGGATGAATTTAGTCCCTCTGAAGAGTATTATGAGCAGGTGAAACCACCATTGAAGAAAAATGGAAAGATGGAATCATATGCTACAACAGATGACAAATTGAAGAAACCCAGTGGTCAGATCAAATGGAAGGACCTCCAAAAAGTGGAACCTCAAACCACACATGCTGAGGATGATTTAAATGCCCTCTTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGCTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTACCGGTTACTGA 2118 0.4429 MNGAGRQGLRSGAAGVHHQRQYSDNFLDGSSNGNRWLQSAGLQHLQSSSNQLPPLQDYNLYGGGGGGAQGGRMYRNAPRSFNGGNEYYMEPSTPPGGYRASMQKKNGEDLSGDFSPGLLDLHSFDTELLPPEMPASNAYDANSLYQPGRGRSFDDSEPYMLSKQTGRARAPENILKSFPADKEKSNSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKDLIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNSKKEVLSSNFNLKESSTVPLSSVTGSAYEDRMTDGWPDENEGDEFSPSEEYYEQVKPPLKKNGKMESYATTDDKLKKPSGQIKWKDLQKVEPQTTHAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04234 705 MobiDBLite consensus disorder prediction 546 571 - -
Pumo4g04234 705 ProSitePatterns Kinesin motor domain signature. 412 423 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo4g04234 705 FunFam Kinesin-like protein 172 516 - -
Pumo4g04234 705 PRINTS Kinesin heavy chain signature 463 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 PRINTS Kinesin heavy chain signature 270 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 PRINTS Kinesin heavy chain signature 413 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 PRINTS Kinesin heavy chain signature 379 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 SMART kinesin_4 188 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 Gene3D Kinesin motor domain 169 516 IPR036961 -
Pumo4g04234 705 ProSiteProfiles Kinesin motor domain profile. 190 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 MobiDBLite consensus disorder prediction 368 387 - -
Pumo4g04234 705 Pfam Kinesin motor domain 196 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g04234 705 PANTHER KINESIN-RELATED PROTEIN 6 569 700 IPR027640 GO:0003777|GO:0007018
Pumo4g04234 705 CDD KISc_KIF2_like 190 511 - -
Pumo4g04234 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 513 IPR027417 -
Pumo4g04234 705 MobiDBLite consensus disorder prediction 369 387 - -
Pumo4g04234 705 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04234 Pumo-Chr4 83270477 83276096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04234 190 523 Calmodulin-binding Proteins AT5G65930 33.908 3.17e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04234 K10393 - gmx:100799100 1373.61