Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04232 ATGTTGGGTGGGTGCGACAGTGATTTTGGGTGGCGCGGTGGTGGCGTTTGGGTCGACGGGGGTATTGGGTGGAGGTGGAGCTTGGGAGAGGCAAAGGCCCAAGACCATTTTGAAAGCCCACTGAAAATCTGGGCTTTCCCACAGCACAGTCCACAAACTGATTTATTTCCATTGCTACCCCTCAACATGGGGAAGGGAACAGGGAGCTTCGGTAAGAGGAGGAACAAGACCCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGCTGCGCCGCCTGCGCTTTCCCCGCCGCACGCAAGAGGAAATATAACTGGAGCGTCAAGGCAATCCGCAGAAAGACCACCGGAACTGGCAGGATGAGGTACTTGCGTAACGTGCCTCGCCGATTCAAGAGTGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCCACTGCATAA 474 0.5633 MLGGCDSDFGWRGGGVWVDGGIGWRWSLGEAKAQDHFESPLKIWAFPQHSPQTDLFPLLPLNMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAAATA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04232 157 Hamap 50S ribosomal protein L37e [rpl37e]. 64 115 IPR001569 GO:0003735|GO:0005840|GO:0006412
Pumo4g04232 157 Gene3D - 63 149 IPR011331 GO:0003735|GO:0005840|GO:0006412
Pumo4g04232 157 ProSitePatterns Ribosomal protein L37e signature. 66 85 IPR018267 GO:0003735|GO:0005840|GO:0006412
Pumo4g04232 157 SUPERFAMILY Zn-binding ribosomal proteins 63 117 IPR011332 GO:0006412
Pumo4g04232 157 FunFam Ribosomal protein L37 63 150 - -
Pumo4g04232 157 PANTHER 60S RIBOSOMAL PROTEIN L37 63 156 - -
Pumo4g04232 157 Pfam Ribosomal protein L37e 65 115 IPR001569 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04232 Pumo-Chr4 83261345 83264097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04232 63 157 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.368 1.73e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04232 K02922 - csv:101221537 176.022