Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04202 ATGGCATCCCGTTTGGTCGTCCTTTGTACTTGTGTGATCATTTTCATGGCTGCCACGAATACTTGTATTGAAGCTTCCATGCAATTCAAAGTTGGTGGTAGCTTTGGTTGGCATGAACCTGGCTCCAACAATACTGAATTTTATATCCAATGGGCTGAAAGGAACAGATTTCAAGTTGGTGATGCTCTTGTTTTTGAATACCAGAATGACTCAGTTCTTGGTGTGGAGAAATTGGATTACATGAATTGTGACGCAAGTAACCCCATCACTGCCTTTGACAATGGGAAGAGCACTTTTAATCTTGACAGGCCTGGGAACTTCTACTTCATCAGTGGAACCGATGATCACTGCAAAAATGGGCAAAAAATACTCGTGGATGTGATGCACCCACATCCTATCCTTAAATCTCCACCCCCCATTTCCCTTCCACCTTCTCTTCCACCTGAAGGCTTTCCACCAATGGCTCCTCCACCTTCTGATGATCAAACCTTTGAGGCTTCATCAGCCTCAGTGCTGCTTACTTCAATTTTTATGTCTCTTTTTGTCACATTTGTTAGTGTGATGCTGTTAGCATCCTGA 579 0.4335 MASRLVVLCTCVIIFMAATNTCIEASMQFKVGGSFGWHEPGSNNTEFYIQWAERNRFQVGDALVFEYQNDSVLGVEKLDYMNCDASNPITAFDNGKSTFNLDRPGNFYFISGTDDHCKNGQKILVDVMHPHPILKSPPPISLPPSLPPEGFPPMAPPPSDDQTFEASSASVLLTSIFMSLFVTFVSVMLLAS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04202 192 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
Pumo4g04202 192 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Pumo4g04202 192 MobiDBLite consensus disorder prediction 138 163 - -
Pumo4g04202 192 PANTHER BLUE COPPER PROTEIN 26 158 IPR039391 GO:0009055
Pumo4g04202 192 FunFam Early nodulin-like protein 1 26 132 - -
Pumo4g04202 192 Pfam Plastocyanin-like domain 44 121 IPR003245 GO:0009055
Pumo4g04202 192 MobiDBLite consensus disorder prediction 138 159 - -
Pumo4g04202 192 CDD OsENODL1_like 28 128 IPR041846 -
Pumo4g04202 192 Gene3D - 27 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04202 Pumo-Chr4 82931298 82932181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04202 5 148 Phytocyanin Superfamily AT1G79800 47.917 4.58e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04202 - - gmx:102664880 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04202 4 82931298 82932181 Pumo4g04202 4 82931298 82932181 ECH