Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04173 ATGGATGGAAAATGGAGATGCCATTGGGCTTGGAGCTTCACTTTGTGGTGTGTCCTTGCATATACCATTTCAGAATTTTCTGGAAAGTCCTTAGTTATGGCCACAGAGAAGAACTCTATGCATCCCAAACAAGGAAGAAGGAAACTAGATGATGTAACTGTTAGGGCTATCATGGACATCAAATCACATTACATGTTGACATCGTCGGTGGGTAAATCCTGGCAAGGAGATCCTTGTGCACCATCGAAATACTCTTGGAATGGACTCAACTGCAGCAATAATGGATATGATTCACCCACAATAACTGCATTAAATCTGGCCTCCAGTGGATTAGGTGGCACAATAATTGCATCATTTTTGGAGCTCAAATTCTTAGAATCCTTCAATTTATCAGGGAACAAACTCTCAGGTGAAATTCCTTCACTCCTCAAGGAAAGATCAAATAATTGTTCACTTTTGTTAAGGCATTCTTTCAGCAGTAGTCTTTTTCATTGTATTGGGTATTGTACTGAGTATCATTTGGAGAAGGAGATGCAACAGAAAACCAGCACAGAAGCACTTCTTGTGCTCTTTGCATTTGTCTTCTTGGCATGGGGCAACGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCAGCCGTGGATGTGGGGAATAATGATTATCTGCCTACCCTTTTCAAGGCTAACTACCCTCCTTATGGAAGGGACTTTATCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCTACTGATATTACTGCTGAAACACTGGGTTTTAAGAGTTATGCACCTGCATATCTTAGCCCTCAGGCATCAGGGAAGAATCTTCTTATTGGAGCAAACTTTGCTTCAGCTGCCTCTGGTTATGATGAAAAGGCTGCTATTTTGAATCATGCGATTCCATTGTCCCAACAGTTAAAATATTACAAGGAATACCAGGGCAAGCTGGCCAAGGTAGCTGGCAGTAAAAAAGCTACATTTATTATTAAGGATGCATTGTACATATTGAGTGCTGGCAGTAGTGACTTTGTGCAAAACTATTACGTCAATCCTTTGATCAATAAAGCCTTCACTCCTGATCAGTATTCTGCATACCTTGTGGGTTCATTTTCAAGCTTTGTTAAGGACTTGTATAAATTGGGAGCCAGGAAAGTTGGAGTGACTTCACTCCCACCTCTGGGTTGCCTACCTGCTGCAAGAACTTTGTTTGGTTTCCATGAGAAAGGTTGTGTCTCGAGGATCAACAATGATGCCCAAGGATTTAACAAGAAAATCAAGTCAGCTGCAGCAAATCTCCAAAAGAAACTTCCTGGTCTTAAGATTGTAGTCTTTGATATTTTCAAACCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGCGGAGATAAGGAAAGGTTGCTGCGGTACTGGGATAGTGGAGACAACATCTTTATTGTGCAATCCAAAATCACTAGGAACTTGTTCTAATGCAACCCAATATGTGTTTTGGGACAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTTTAGCCGATGCATTGATTGTACAAGGCATAGCCCTTATCACTTAA 1596 0.4135 MDGKWRCHWAWSFTLWCVLAYTISEFSGKSLVMATEKNSMHPKQGRRKLDDVTVRAIMDIKSHYMLTSSVGKSWQGDPCAPSKYSWNGLNCSNNGYDSPTITALNLASSGLGGTIIASFLELKFLESFNLSGNKLSGEIPSLLKERSNNCSLLLRHSFSSSLFHCIGYCTEYHLEKEMQQKTSTEALLVLFAFVFLAWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFINHQPTGRFCNGKLATDITAETLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYKEYQGKLAKVAGSKKATFIIKDALYILSAGSSDFVQNYYVNPLINKAFTPDQYSAYLVGSFSSFVKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHEKGCVSRINNDAQGFNKKIKSAAANLQKKLPGLKIVVFDIFKPLYDLVQSPSKFGFAEIRKGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQVLADALIVQGIALIT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04173 531 PANTHER GDSL ESTERASE/LIPASE EXL3 192 522 - -
Pumo4g04173 531 CDD SGNH_plant_lipase_like 207 523 IPR035669 -
Pumo4g04173 531 FunFam GDSL esterase/lipase APG 198 527 - -
Pumo4g04173 531 Gene3D SGNH hydrolase 199 526 IPR036514 -
Pumo4g04173 531 Gene3D Ribonuclease Inhibitor 52 180 IPR032675 -
Pumo4g04173 531 Pfam GDSL-like Lipase/Acylhydrolase 209 521 IPR001087 GO:0016788
Pumo4g04173 531 SUPERFAMILY SGNH hydrolase 209 522 - -
Pumo4g04173 531 SUPERFAMILY L domain-like 78 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04173 Pumo-Chr4 82633374 82640434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04173 187 523 Pollen Coat Proteome AT1G75910 34.412 2.26e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04173 - - gmx:100795716 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04173 4 82633374 82640434 Pumo4g04173 4 82633374 82640434 ECH
Pumo4g04173 4 82633374 82640434 Pumo7g00284 7 3377490 3379633 PCT