Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04153 ATGGCAACCAACGAAGCAGAAGAAGCAGCCAAAAGGGTCCAATACCCACTGGACTCTTCCTCCTACAAGCTCCTCAAAGAGATCGGCGAAGGCATGAGCGCCGTCGTGTACAAGGCCCTCTGCATCCCCATGAACTCCGCCGCGGTTGCAATCAAATCCATCGACCTTGATCCACACTGTTCCTTCACCGTGGATCGCCGCCTCTGGGTGGTGATGCCCTTCATGGCCGCAGGATCGTTGCAATCCATAATTTCTCATTCCTACCCCAACGGCTTAACGGAGCCCTGCATCGCGGTGGTTCTCAAAGACACCCTCAACGCTCTCTCGTACCTCCACGGCCAGGGCCATCTCCACAGAGACATAAAAGCCGGTAACATCCTCGTAGACACCAACGGACTGGTGAAGCTCGCGGATTTTGGTGTCTCCGCGTCCATCTACGAGTCCACGTGTTCGTCTCTCAAGTTCACCGATGTTGCGGGCACGCCGTATTGGATGGCTCCTGAGGTGATTCACTCACACACCGGTTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATAACCGCTCTGGAGCTTGCGCATGGAAGGCCTCCCCTCTCGCACCTTCCACCTTCCAAGTCCATGATGCTCAAGATCACCAAGCGATTTCGTTTCTCCGATTTTGATAAGTATAGGAAGGGGAATGGGAAGAAGTTTTCTAAGGCGTTTAAGGACTTGGTGGCTTCTTGTCTCGACCAAGATCCTTCTAAGAGACCCACTGCTGACAAGTTGCTCAAACATCCCTTCTTTAAAAACTGTAAGGGAACTGATTTTCTGGTGAAGAATGTGCTCCAAGGGTTGCCCACTGTGGAGAAAAGGTATAAGGAGAGCGAGGTTAATGAGCATGCAGATGATGATGATGATGATGACCCTGCCTTGCAGGTGAAGCAGAGAAGGATCAGTGGGTGGAACTTCAATCAAGACGGGTTGGAACTTGACCCTGTGTTTCCTAACGATGATGCAGCGGTGAAAGAGGTTCGGTTTGGAGGGGAAACGGTTATCCAACAAACGGGGGAGCATGTTAACATTGTTGCTGCTGCTGCACCTGCAGGAACCATGGTGGAAAAAGTGGGTGGTGTTGTGAACAACAAGGAAGGCATGTTGGCGACTCTGAATGTATTGAAAGGGAGCTTGGAGCAAGAGCTGTGGCAAGTGAAGTTTCTGGTGAATGCGATACAAGGAGAGGAGACTCAACTCACTCAAGTGACTGATCACAGTGAGGAGCAGGAGATTTCTAAGCTGAGAGCTGAATTAGAAAATGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAGCTCCAAACCTGCAAGCTCCACCTTTCTTCTGGTCTTAATACTTCCAAGTAA 1383 0.5047 MATNEAEEAAKRVQYPLDSSSYKLLKEIGEGMSAVVYKALCIPMNSAAVAIKSIDLDPHCSFTVDRRLWVVMPFMAAGSLQSIISHSYPNGLTEPCIAVVLKDTLNALSYLHGQGHLHRDIKAGNILVDTNGLVKLADFGVSASIYESTCSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDFDKYRKGNGKKFSKAFKDLVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVKNVLQGLPTVEKRYKESEVNEHADDDDDDDPALQVKQRRISGWNFNQDGLELDPVFPNDDAAVKEVRFGGETVIQQTGEHVNIVAAAAPAGTMVEKVGGVVNNKEGMLATLNVLKGSLEQELWQVKFLVNAIQGEETQLTQVTDHSEEQEISKLRAELENERKKNLQLELQLQTCKLHLSSGLNTSK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04153 460 Coils Coil 417 444 - -
Pumo4g04153 460 Gene3D Phosphorylase Kinase; domain 1 10 58 - -
Pumo4g04153 460 FunFam Serine/threonine-protein kinase BLUS1 78 305 - -
Pumo4g04153 460 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04153 460 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Pumo4g04153 460 Pfam Protein kinase domain 62 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04153 460 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 14 428 IPR047173 GO:0043539
Pumo4g04153 460 SUPERFAMILY Protein kinase-like (PK-like) 16 268 IPR011009 -
Pumo4g04153 460 Gene3D Transferase(Phosphotransferase) domain 1 78 312 - -
Pumo4g04153 460 SMART serkin_6 22 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04153 Pumo-Chr4 82143024 82144584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04153 9 440 MAP Kinase Kinase Kinase Kinase AT4G14480 52.165 1.13e-161 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pumo4g04153 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04153 K08835 - gmx:100820227 721.079