Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04152 ATGGACAACAGCATGTCAAGGAGCACCACACAGGCTTGTGCAGCTTGTAAGTACCAACGCAGGAAGTGCGGGTCCAACTGCATTCTCGCACCTTATTTTCCTCATGATCGCCAAAAACAGTTCCTTAATGCCCATCGATTATTCGGGGTTGGCAAGATCACCAACATGATCAAGCCCCTTGATCAACATCACCGAGACTTGGCCATGAGCACAGTTATTTACGAATCAGACATGCGTGCCAGAGATCCCGTTGGAGGCTGCTTTAGGCTCGTCCTACAATTGCAATCTCAGATTGAATACGCCAGTCAAGAGCTTAATCTCGTTCTTCAACATCTTGCTTTCTTCAAAGCACAAGCTAATTCTCATGACATCGTCAATGCCACGCCTCAGCTACCTTACCTTGAACAAATACAAATGCCACCACACGAACAGCAGCAGCAGCAACAACAATGCTTTAGTTACAACCCTCTACAAGAAGAAGATATCAACGTGTGGGCAATTCAGAATTCCGTTCCTTTGTCACCTTTGTCATTAGAGGATGACATCAACCAAGATCCTGTTGTGGATCCTGTTGTCGATGATTATGGATATGATCAAAAACCTGGTGTTCTTGACCTGATGAATAAAATAAAATCAGATCCAAGTGCCAAATATTAG 657 0.4429 MDNSMSRSTTQACAACKYQRRKCGSNCILAPYFPHDRQKQFLNAHRLFGVGKITNMIKPLDQHHRDLAMSTVIYESDMRARDPVGGCFRLVLQLQSQIEYASQELNLVLQHLAFFKAQANSHDIVNATPQLPYLEQIQMPPHEQQQQQQQCFSYNPLQEEDINVWAIQNSVPLSPLSLEDDINQDPVVDPVVDDYGYDQKPGVLDLMNKIKSDPSAKY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04152 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 149 - -
Pumo4g04152 218 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Pumo4g04152 218 Pfam Lateral organ boundaries (LOB) domain 12 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04152 Pumo-Chr4 82132802 82133458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04152 11 168 AS2 family AT3G13850 45.604 2.26e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo4g04152 LOB 2.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04152 - - gmx:102668887 313.153