Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04137 ATGTCCTTCGAAGGCTTGGATGACCAGAGGATGCATTTAGTCATGAGGATGAAAGAAATTGCACATGGGATTATTGATAAACAACCTAGAGTTGCAATAACCAGGCCTGATTTACTTGCAGAACAAGTTGGCTTTGTGGATGAAGGGATGAGAGATAGTCCTGTGGTTGAGTCAACCAAGATCTGCAATGGGGATGCCCTGATTGACGGGGCACAGAGCATGACTAATGAAGATGAGATGTTGGATGTGGAACATGTTTTAAGATTTGAAAATGGGATGGATGAAGTACAGGAGTCTTTGTTACCTTGCTTTCAGCAATTTCTTATGTGGCCCCCTGATGGTTGCGTCACCTTAGAGTGGGTTCAGGACATGATGGTCATCCTTGAGCAGGCTTCACAGAAGATGCTGCCATCTGAATTCTGTCATGTCATGCCGACCATTTTGGTGGACAAATTGGCAGATGCTGCTTGCAGTATTTTGTGTAAAGAACCTAACTGTGTGGAGATTGATTGTCAAGGAGAAGATTCAAGAGTAATTGTAGTAGGCGATATACATGGGCAGTTTCATGATTTAATATTTCTTTTCAAGCATGCAGGAGTGCCCTCTGAGAACCAGATTTATGTTTTTAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTTTTGGTCTTGCTGGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTTCGTGGAAATCATGAATCAAAATATACCACTGCAAGATATGGTTTTAAGAAGGAGGTTTGGGCAAAATATGGTGATCAAGCTTCAGTTATTGCTAACTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGTATACATGCAGCCCCTTCACAGAAACCCAAACGGAATAAAACACACAGGGTGGATCTTGGCTCTTTAGCTGAGTTATCTGAAGTTAAAAGATCTTGTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGTGATGTTCTCTGGTCAAGACCATCTAACAGGGATGGCCTGAGGGATAATACAGGTCAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTCTTAAAGCAGCACAATTTAAAGCTGATTATCAGATCACATGAAGGACCAGATGCAAGGGCTGGTAGAGATGATGATTTTGGGGATATGCTGAGTGGGTACAGCATAGATCATGATGGAGAATCGGGAAAACTATATACACTTTTTAGTGCTCCAGACTATCCCCAGTTTGGTAAAAGGAGATATAACAATAAGGGGGCATATGCAGTATTGAAGTCGCCTGATTTTGCCAGTCCTTCCTTTCACTCATTCAAAGCGGCAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGATGCTAATAACATGGACTCGAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTACCCTTTCTGCTCCTCAAAGATTTTATCCAGATGGGGTGAGACCTGAGTTTGACTTTGAGGCATTAGGCATATATAATGCCCCATGTTGGAATGTAGAACTTCCTGATGGTTCAGGTGGTACTCAAGTTGTCGAGGTTCCAAGGGCACCTTTGGTGGAAGGATTACCTCTGCCTCCAAACATACAGGAGCCACACAAGGCTGCATATGAGTATTTGTTTGAGCTAGTTGCTGGCCTGAAACGTATGATTGTAACAAGGGAGACTGAGAACAGGGCCCGTGTGTCTGCTTTGAGAAGTAGAGCTAGGAAACGAAAGGGTAAGGGTAACTCATAG 1770 0.426 MSFEGLDDQRMHLVMRMKEIAHGIIDKQPRVAITRPDLLAEQVGFVDEGMRDSPVVESTKICNGDALIDGAQSMTNEDEMLDVEHVLRFENGMDEVQESLLPCFQQFLMWPPDGCVTLEWVQDMMVILEQASQKMLPSEFCHVMPTILVDKLADAACSILCKEPNCVEIDCQGEDSRVIVVGDIHGQFHDLIFLFKHAGVPSENQIYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVYLLRGNHESKYTTARYGFKKEVWAKYGDQASVIANCVYTTHGGLFRSIHAAPSQKPKRNKTHRVDLGSLAELSEVKRSCVDCPYEGPNILLSDVLWSRPSNRDGLRDNTGQKLGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDDDFGDMLSGYSIDHDGESGKLYTLFSAPDYPQFGKRRYNNKGAYAVLKSPDFASPSFHSFKAAERPMVDPYVDFDANNMDSSKLDSSQSASTSTLSAPQRFYPDGVRPEFDFEALGIYNAPCWNVELPDGSGGTQVVEVPRAPLVEGLPLPPNIQEPHKAAYEYLFELVAGLKRMIVTRETENRARVSALRSRARKRKGKGNS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04137 589 SMART pp2a_7 144 450 IPR006186 GO:0016787
Pumo4g04137 589 Gene3D - 114 485 IPR029052 -
Pumo4g04137 589 MobiDBLite consensus disorder prediction 465 484 - -
Pumo4g04137 589 Pfam Calcineurin-like phosphoesterase 177 379 IPR004843 GO:0016787
Pumo4g04137 589 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Pumo4g04137 589 PRINTS Serine/threonine phosphatase family signature 207 234 IPR006186 GO:0016787
Pumo4g04137 589 PRINTS Serine/threonine phosphatase family signature 406 422 IPR006186 GO:0016787
Pumo4g04137 589 PRINTS Serine/threonine phosphatase family signature 240 264 IPR006186 GO:0016787
Pumo4g04137 589 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 110 569 - -
Pumo4g04137 589 ProSitePatterns Serine/threonine specific protein phosphatases signature. 241 246 IPR006186 GO:0016787
Pumo4g04137 589 SUPERFAMILY Metallo-dependent phosphatases 140 456 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04137 Pumo-Chr4 81994714 82001286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04137 108 371 Calmodulin-binding Proteins AT5G63870 49.485 8.73e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04137 K04460 - gmx:100779241 966.837