Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04136 ATGGCACGGGGGAGGATCAGGGCAAGGCTCCGAAGGAGCCATCTTTACACATTTGGTGGTTGCCTGAAGCCAACTACCACTGAGGAGGTGCCTCATCCACTTGAAGGTCCTGGCTACTCACGAACAGTGTACTGCAACCAGCCTCAACTCCATGAAAAGAAATCTCTATTTTACTGCAAGAATGATATATCAACCACCAAATACAATGTCATCACGTTTTTCCCTAAGGCATTGTTTGAACAATTTCGAAGGGTTGCTAATATATACTTCCTTTTGGCTGCTTGCCTTTCGGCATCTCCAATTTCACCTTTCAGCCCACTAAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAGGCATTGGAGGATTCGCGCAGGTTCCTTCAGGATGTCAAAGTTAATCGCCGGAAAGCTAGTCTCCATAAAGGCAATGGCGTTTTTGGTCTCAGGTCCTGGCAGAAGATTATGGTTGGGGATGTGGTAAAAGTAGAAAAGGACCAATTTTTTCCAGCTGACTTGCTTCTCTTGGCGTCAAGTTATGAAGATGGGATATGCTATGTGGAGACAATGAATTTAGATGGGGAGACCAACTTGAAGGTGAAGAGATCTTTGGAGGCTACCTTGTCTCTGGATAATGATGGGGCTTTTAAGGATTTCTCTGGAACAATACGTTGTGAAGATCCCAATCCCAATCTTTACACTTTTGTTGGGAATTTTGAGTATGAAAATCAGGTTTATCCTCTTGATCCTGGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAACACTGATCATGTCTATGGAGTGGTCATTTTCACTGGACATGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGAAGCACAATAGAAAAAAAGATGGATTATATCATATACACTCTTTTCACTGTCCTTATATTGATATCTTTCATTAGTTCAATAGGATTTGTTGCGAAGACCAAATACCAAACCCCAGAGTGGTGGTATTTACGGCCTGACAGTATTGAATACCAGTTTGATCCTGGGAAAATTGGATTGGCTGGGATGAGCCATCTGATTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCGCTTTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCAACCTTCATTAACCAAGACATTCAAATGTATGATGATGAATCTGGGACTCCAGCTGATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATCCTATCTGATAAAACTGGCACTTTAACCTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACTGCATATGGTGTTCGTTCCAGTGAAGTCGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGACGAGCAGGAATTGGATCTCTCTAATTTCCCCATGCGGAAGGAGAGTAAAGTGCCAGTGGGAAAATATCACAGAAGATGA 1479 0.4266 MARGRIRARLRRSHLYTFGGCLKPTTTEEVPHPLEGPGYSRTVYCNQPQLHEKKSLFYCKNDISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKASLHKGNGVFGLRSWQKIMVGDVVKVEKDQFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLEATLSLDNDGAFKDFSGTIRCEDPNPNLYTFVGNFEYENQVYPLDPGQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQTPEWWYLRPDSIEYQFDPGKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDESGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLDEQELDLSNFPMRKESKVPVGKYHRR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04136 492 Coils Coil 449 469 - -
Pumo4g04136 492 NCBIfam phospholipid-translocating P-type ATPase 58 469 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo4g04136 492 Gene3D - 433 454 IPR023299 GO:0000166
Pumo4g04136 492 SUPERFAMILY Calcium ATPase, transduction domain A 149 287 IPR008250 -
Pumo4g04136 492 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 462 - -
Pumo4g04136 492 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Pumo4g04136 492 SUPERFAMILY HAD-like 411 460 IPR036412 -
Pumo4g04136 492 Gene3D - 420 432 IPR023214 -
Pumo4g04136 492 Gene3D - 113 289 - -
Pumo4g04136 492 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 417 IPR023298 -
Pumo4g04136 492 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pumo4g04136 492 FunFam Phospholipid-transporting ATPase 119 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04136 Pumo-Chr4 81988325 81989803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04136 1 469 Primary Pumps ATPases AT1G17500 74.681 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04136 K01530 - gmx:100792942 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04136 4 81988325 81989803 Pumo7g00387 7 5597550 5603532 PCT