Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04124 ATGAAAACTAGACAGATTTTTGTCAAACCAGCACCGTTCTTAATTATGGGTTCAAATGCAGAAGAAGAGTCCACCGTCATCGCCATTGATAGTGACCGGAACAGCCAACGCGCGGTCAAATGGGCTGTGGAACATCTTTTGAAAAAGAACTCCTCATGCACCCTCATTCACGTCAGAACCAAGAACTTGTATCCTCATGATTTTGAGGCTGTCCCTAAACAAGGTCGTCTGCCAACAGAAGAAGAATTGCACCAGTTTTTTCTTCCTTTTCGAGGATTTTGTGCAGCGAAAAGGGCTAAGGAGTTAGTCCTGCATGACATTGACGTTTCAAATGCACTTACTGATTTCATCGTTGACAACTCTATCAACAATATTGTTGTTGGCGCTTCCCGCTGGAATTCTCTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAGTCAAGTCTGTGCCAGAGTCTTGCACGGTGCATGTTATATCAAAAGGAAAAGTGCAGAATATTCGACCAGCAGGTCATTCTCAAAATATTAGTATCGCACTATCGAAATCTTTAAAAGGCATTAGGGGAAGTTTCCGGTCTGAAGATTTAAACAGAAAATCATTTAAGCATGGAGTTAGGCAAGGCTCAAATAATGATGGGGTATCTTCAGTGACACCATGTATGACCAATGGAGAAACTACTTCGCCAAAACTATCAGATGAAAGTTGCTCCTCACAAAATTCATCCAATCGAAGTTCCCTCACAGGTGACACTTCAAGGCTGCTTGGTTATCAATTGACTGAGACGTCACTTGAAAACCAAGATGTATTGGAAATAGAAAAAAGGAAACTAAAACTAGAACAGGAGAGAACGACAAAGAAGTGTAATTCAACCCGCAGAGAAACTGCAACAGCAGCACAAAAGGCAATGAAGCATGAAAAGTTTACGCAAGAAGAGGATGTAGTTAAAGCTTGGCTTGCTGAAGCGGCTACATTGACTTTGGCAGAGGTAGAAAGGAAGAAAACCAAGGCAGCTATGGAGTCAGATGAAATGTCAAAATGCCTAACAGAAATGAAGAGCCAGAAGGGAAAACAAACTGAAATAAGAGCCATGCATGAGGAAGAAGAGAGGAATAAAGCATTAAATGCAAGTGAACATAACAAAATTTTATTTAAAAGATACAATATCAAAGAAATTGAAGTTGCAACTAATTACTTTGACATTGCCCTCAAAATCGGTGAAGGTGGATATGGACCTGTTTTTAAAGGGGTGCTTGATCACACTGATGTTGCAATCAAGGCCCTGAAGCCTGATATATCCCAAGGGGAAAGGCAGTTTCAACAAGAGGTTAATGTTTTGAGCACAATAAGACATCCGAACATGGTTCAACTTCTAGGTGCCTGTCCAGAGTACGGATGCCTTGTATATGAGTACATTGAAAATGGCAGCTTAGAAGATCGCCTATTCCAAAAAGATAACACTCCAACAATTCCATGGAAATTTCGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCGGTTGTGCATCGTGATCTTAAGCCAGCAAACATTCTATTGGACCGCAACTATGCGAGCAAGATCACTGATGTGGGTTTGGCAAGGCTAGTTCCCCCTAGTGTAGCCAACAAAACCACTCAATACCACAAGACAACTGCAGCTGGTACATTTTGCTACATTGACCCAGAATATCAACAAACAGGACTATTGGGTGTAAAATCAGATATATATTCATTAGGTGTAATGCTGCTACAAATTATCACTGGAAAGCCTCCTATGGGTGTGGCACACCTAGTTCAAGAAGCTATAAACAATGGTAATTTCCCAGAGGTGCTTGATCCAAATGTCACTGATTGGCCCGTTGAAGAGACTTTATCATATGCTAGGTTGGCTTTGAAGTGTTGTGAGATGAGAAAACGGGATAGACCAGACCTTGGTTCTGTCATCTTGCCAGAGCTAAATCGACTTCGAAACTTGGGAGAACCAACAACTGACACTAATATTGTACCCACCAAACAGATCCATATAAGAAGGTATAAACTCCCCAAGTTCAAAGGCAACATGTGGAACATTGTACGTCATTTGTGGAAACCAGGCCTCTTACCATCAATTGGGAAACATGTTGGGAAGATGAACATGAAGGATGCTTATCAAGGCTGCTGGGCTTTTGCAAGTGGCTTAAGTCCTGTCTGGAAGCCTCTCCAATGGCGTACCAGACCCCGGATCAAGATTCAGGTTCCGATCCCAAGACCCCAACGCGCCTTTACAACCCCTACAAGGACCTCGAAGTCCCCATTCGCAACCTCTACCAGCTCCCAACCTCCCCCGAGTACCTCTTCGTCGAGGAGGCTCGCCGCAAGCGCCGATCCTGGGGCGAGAACCTCACCTTCTACACCGGCTGCGGCTACCTCGCCGGCGCCGTCGGTGGCGCCGCCTCCGGCCTCAGTCGACGGCGTCAAATCCTTCGAGTCCGGCGACACCGCCAAGCTCCGCGTCAACCGCGTCCTCAACTCCTCCGGCCACGCCGGCCGCGCCTGGGGAAACCGCCTCGGCGTCATTGGCCTCCTCTACGCCGGCATCGAGAGCGGGATCGTGGCGGCGAGGGACACCGACGACGTCTGGAACAGCGTCGCGGCGGGACTCGGCACCGGCGCGCTGTATCGCGCCGCGAGAGGGGTGCGATCGGCGGCGGTGGCGGGCGCCGTCGGCGGCGTCGTGGTTGGAGTCGCTGTCACGGCGAAGCAGGCGTTGAAACGCTACGTGCCTATATGA 2805 0.4684 MKTRQIFVKPAPFLIMGSNAEEESTVIAIDSDRNSQRAVKWAVEHLLKKNSSCTLIHVRTKNLYPHDFEAVPKQGRLPTEEELHQFFLPFRGFCAAKRAKELVLHDIDVSNALTDFIVDNSINNIVVGASRWNSLIRKFKDVDVPTSLVKSVPESCTVHVISKGKVQNIRPAGHSQNISIALSKSLKGIRGSFRSEDLNRKSFKHGVRQGSNNDGVSSVTPCMTNGETTSPKLSDESCSSQNSSNRSSLTGDTSRLLGYQLTETSLENQDVLEIEKRKLKLEQERTTKKCNSTRRETATAAQKAMKHEKFTQEEDVVKAWLAEAATLTLAEVERKKTKAAMESDEMSKCLTEMKSQKGKQTEIRAMHEEEERNKALNASEHNKILFKRYNIKEIEVATNYFDIALKIGEGGYGPVFKGVLDHTDVAIKALKPDISQGERQFQQEVNVLSTIRHPNMVQLLGACPEYGCLVYEYIENGSLEDRLFQKDNTPTIPWKFRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYASKITDVGLARLVPPSVANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVQEAINNGNFPEVLDPNVTDWPVEETLSYARLALKCCEMRKRDRPDLGSVILPELNRLRNLGEPTTDTNIVPTKQIHIRRYKLPKFKGNMWNIVRHLWKPGLLPSIGKHVGKMNMKDAYQGCWAFASGLSPVWKPLQWRTRPRIKIQVPIPRPQRAFTTPTRTSKSPFATSTSSQPPPSTSSSRRLAASADPGARTSPSTPAAATSPAPSVAPPPASVDGVKSFESGDTAKLRVNRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIVAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04124 934 MobiDBLite consensus disorder prediction 753 833 - -
Pumo4g04124 934 PANTHER OS02G0152300 PROTEIN 26 679 - -
Pumo4g04124 934 MobiDBLite consensus disorder prediction 763 815 - -
Pumo4g04124 934 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 139 - -
Pumo4g04124 934 Pfam Universal stress protein family 26 155 IPR006016 -
Pumo4g04124 934 SUPERFAMILY Protein kinase-like (PK-like) 383 659 IPR011009 -
Pumo4g04124 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Pumo4g04124 934 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 473 - -
Pumo4g04124 934 MobiDBLite consensus disorder prediction 202 252 - -
Pumo4g04124 934 Pfam Protein kinase domain 405 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04124 934 CDD STK_N 24 164 - -
Pumo4g04124 934 Pfam Tim17/Tim22/Tim23/Pmp24 family 829 917 - -
Pumo4g04124 934 Gene3D Phosphorylase Kinase; domain 1 378 473 - -
Pumo4g04124 934 FunFam Os07g0541700 protein 474 567 - -
Pumo4g04124 934 Gene3D HUPs 23 161 IPR014729 -
Pumo4g04124 934 ProSiteProfiles Protein kinase domain profile. 401 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04124 934 SMART serkin_6 401 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g04124 934 MobiDBLite consensus disorder prediction 205 252 - -
Pumo4g04124 934 Gene3D Transferase(Phosphotransferase) domain 1 474 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04124 Pumo-Chr4 81862344 81869809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04124 24 677 Receptor kinase-like Gene Family AT1G78940 42.718 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pumo4g04124 Pkinase 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04124 - - gmx:100814365 1088.17