Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04118 ATGAACTTGGGTGCAGCCGAGGAAGAATCATCGGCTGCACAAATTCATGTCCCTGCGGAAATTGATTGGCACAAACTCGATAAATCGAAGTTTTTCTGCTTCGGTGCAGCACTTTTCTCTGGGGTTTCCGCGACCCTTTACCCTGTTGTTGTGTTGAAAACGCGCCAACAAGTTTTTCCATCTCAGATTTCTTGCATCAGAACCGCGTTTTCATTGATTAGACTTGAGGGTTTTAGGGCACTGTATAGAGGGTTTGGTACTTCTTTGATGGGTACAATCCCTGCTAGGGCTTTGTACATGGCTGCACTTGAGATCACCAAGAGTAATGTAGGCACTGCTACCCTTAAGTTTGGGGTAGCTGAACCTACTGCTGCCACTATTGCCAATGCTGCTGCTGGGTTAAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCAGTTGATGTTGTGAGTCAGAGGTTGATGGTTCAAGGTGTTGTGTCTAATTCTAATTATAAGTCATCAACTCAATATATGAATGGGATTGATGCCTTCAGGAAAATTCTCAAGAATGATGGGCCTAAGGGGTTGTACAGGGGTTTTGGGATATCAATTTTGACCTATGCACCTTCCAATGCTGTTTGGTGGGCTTCATATTCTGTGGCACAGAGAATGGTTTGGGGTGGGGTGGGGTGGTGCTTGTGCAAGAAAGGTTGTGGTGGTGAGAGTGAATTGAGGCCAGATTCTAAGACAGTGATGGCTGTTCAGGGAGTGAGTGCTGCAATGGCTGGTGGCATGTCTGCTTTGATTACCATGCCATTGGACACCATCAAGACAAGGCTTCAGGTGTTGGATGGCGATGAGAACGGGCGCCGCGGACCGACTGTTATGCAGACAGTGAGGAATTTGGTTAGGGAGGGTGGTTGGATGGCATGTTATAGAGGGTTGGGACCTAGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACAACTTATGAGTTCCTTAAACGACTTTCCACGAAAAATCAAGAGGTTTTGACTTGA 1029 0.4684 MNLGAAEEESSAAQIHVPAEIDWHKLDKSKFFCFGAALFSGVSATLYPVVVLKTRQQVFPSQISCIRTAFSLIRLEGFRALYRGFGTSLMGTIPARALYMAALEITKSNVGTATLKFGVAEPTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGVVSNSNYKSSTQYMNGIDAFRKILKNDGPKGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGWCLCKKGCGGESELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRNLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVLT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04118 342 Gene3D Mitochondrial carrier domain 30 340 IPR023395 -
Pumo4g04118 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 218 IPR018108 -
Pumo4g04118 342 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 339 - -
Pumo4g04118 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 109 IPR018108 -
Pumo4g04118 342 SUPERFAMILY Mitochondrial carrier 25 330 IPR023395 -
Pumo4g04118 342 Coils Coil 330 342 - -
Pumo4g04118 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 333 IPR018108 -
Pumo4g04118 342 Pfam Mitochondrial carrier protein 36 109 IPR018108 -
Pumo4g04118 342 Pfam Mitochondrial carrier protein 247 337 IPR018108 -
Pumo4g04118 342 Pfam Mitochondrial carrier protein 126 219 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04118 Pumo-Chr4 81848274 81849944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04118 1 339 Chloroplast and Mitochondria Gene Families AT1G72820 74.493 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04118 K15121 - gmx:100803360 582.793