Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04106 ATGGAATACCCTTTTTCCCCCAAGGAAAGAGTAATTGGGGATTGGCAATCTTCTGGAGCTCAGTTGGAGGGATCAACATCATTAGATGGCAGAATGAGCAATTCAATATCTGAGGATTTACCCAATAGCTTTTCCGAGCTCATGAACTTTGATACTTATGCTGGTTTGTGCAACAGCCCATCCATAACTGATCAGATTTTGGCTAATGAGCTTCCATCATTTGCCTCATTATCATATCCGTTGCCCGATGGATTCAATCTAGTCCAACAGAACAGTGGGCAATGCTGTATGTCAGGAGTTGGCAGAAATAACAATGATATGGAAAGCTCCCCCATTTATGGGGAGAAAGTTGTGTGTCAGCAAATGGACACCCTACTAGGTTTCTTAAATGACACAAATGAAGCAAATAACTTGAATTCTAAGCTAAAAATTAATGGCTCTTCTCAACATCTTAATAACTCTGATACAGGCAATTATATAATGTCCCGTCCACCTGGTTTGTCACTTGATGAGAGAATGCTGAGGGCTTTGTCCTTCTTTAAGGAATCTGCTGGTGGGGGAATATTGGCACAAGTTTGGGTACCCATAAAGCATGGTGATCAATTCATCTTAAGCACGAGTGAGCAACCTTATTTGCTAGATCAAATGCTCGCAGGGTATCGTGAAGTGTCCAGGACATTTACATTTTCTGCAGAAGGAAAATCTGGTTGTTTCCTAGGACTTCCTGGTCGTGTGTTTACCTCCAAAGTCCCTGAGTGGACTTCAAATGTTGGTTATTACAGTATGAGTGAGTACTTAAGGTTCGAGCATGCAATTAATCACAAGGTTCGTGGATCAATTGCATTTCCCATATTTGATCTGTACTCTGAACTTCCATGCTGTGCTGTACTGGAACTTGTCACTACAAAGGAAAAGCCAGATTTTGACAGAGAATTGGAAATTGTTTGTCGTGCACTTCAGCTTGTAAATTTAAGGACTGCCAAGCCTCTCCGATGTCTTCCCCAGTGTCTTTCAAACAACAAAAAAGCTACTTTGAATGAGATAGTTGATGTGTTACGATCTGTCTGTCATGCACATAGATTACCACTGGCACTGACATGGATTCCCTGTTGTTACACTGAGTGCTCGAGAGGTGAAGCTACAAGGATACAAATTAAAGGGGGTCATTCAACTTCTAGTGGAAAAAGCATACTGTGCATTGAAGAATCTGCTTGCTATATAACTGATAGAGCAATGGCAGGATTTGTCCGTGCATGCATGGAACATCATCTTGAGGAAGGGAAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCATCCTTTCTTCTATCCTGATGTGAAGACGTATGATATAAGTGAATATCCACTTGTCCATCATGCACGCAAGTATAATTTGAATGCTGCAGTTGCAATTAGGCTAAGGAGTACTTATACTAATGATGATGATTACATATTGGAATTCTTTCTGCCTGTCAATATGAGAGGGGGTTCAGAAGCAGCAACTTTTATTAGACAACCTCTCAGGTACCATGCAGAGAATTTGTAG 1545 0.4097 MEYPFSPKERVIGDWQSSGAQLEGSTSLDGRMSNSISEDLPNSFSELMNFDTYAGLCNSPSITDQILANELPSFASLSYPLPDGFNLVQQNSGQCCMSGVGRNNNDMESSPIYGEKVVCQQMDTLLGFLNDTNEANNLNSKLKINGSSQHLNNSDTGNYIMSRPPGLSLDERMLRALSFFKESAGGGILAQVWVPIKHGDQFILSTSEQPYLLDQMLAGYREVSRTFTFSAEGKSGCFLGLPGRVFTSKVPEWTSNVGYYSMSEYLRFEHAINHKVRGSIAFPIFDLYSELPCCAVLELVTTKEKPDFDRELEIVCRALQLVNLRTAKPLRCLPQCLSNNKKATLNEIVDVLRSVCHAHRLPLALTWIPCCYTECSRGEATRIQIKGGHSTSSGKSILCIEESACYITDRAMAGFVRACMEHHLEEGKGIAGKALQSNHPFFYPDVKTYDISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMRGGSEAATFIRQPLRYHAENL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04106 514 PANTHER PROTEIN NLP8 136 498 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04106 Pumo-Chr4 81767544 81770984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04106 1 498 NLP Transcription Factor Family AT2G43500 51.186 3.27e-154 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04106 - - gmx:100812210 953.74