Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04104 ATGGGTGTGGCTTTCCCACTAGTAGCTCTTGCAGTGGTGAGCATGTGTTATGGAATGGCAGATGCAGCGGTGACACCACCAACGAATTTGCGCTGGCATTATTATAAGACCACCAATACATGCCGCGAGGCAGAGGAGTATGTCCGGCACCAAGTGAAACTGTTTTGGAAGAATGACAGAAGCATTACGGCAAAGCTCCTCCGATTGGTTTATGCTGACTGTTTTATCACTGGATGTGATGCATCAATTCTGCTTGACGAAGGACCAAATCCGGAGAAAGAAGCACCACAAAACCGGGGGCTAGGAGGATTTGTGGCCATTGACAAGATCAAAGCTGTTCTGGAATCACGATGCCCTGGAATTGTCTCCTGTGCTGATATACTCCACCTCGCCACCAGGGATGCTGTTCAACTGGCAGGTGGACCAGGTTACCCAGTTTTAACAGGTAGAAAGGATGGCATGAAATCAGATGCTGCATCAGTAGACCTGCCATCACCATCCGTCTCGCTGCAGAAAGTCCTAGATTATTTCAAATCGAGGAACTTGAATGTAGTAGACATGACGACACTTTTAGGAGCGCACACAGTGGGCCGAACACATTGTAGCTTTATTGTTGATCGGCTCTACAACTACAATGGTTCCGGAAAACCCGACCCAAGCATGAGTGCTACTTTACTAGAGTCATTGAGAAAAGTTTGCCCGCCAAGAAAGAAGGGACAAGCAGACCCTCTGGTGTACCTAAACCCACAATCTGGATCACGTTACAACTTCACAGAATCATGCTACAGAAGGATCCTATCCCACGAAGCTGTCCTGGGAGTTGATCAACAATTACTAAATAGTGATGACACTAAACAGATCACCGAGGAGTTCGCCGCTGGATTTGAAGATTTTCGGAAATCTTTTGCTACATCAATGTACAAGATGGGGAATTACAGGGTTTTAACGGGAAACCAAGGAGAGATACGCCGATATTGCCGATACACAAATAAGGGCTTAATAAATTAG 1008 0.4633 MGVAFPLVALAVVSMCYGMADAAVTPPTNLRWHYYKTTNTCREAEEYVRHQVKLFWKNDRSITAKLLRLVYADCFITGCDASILLDEGPNPEKEAPQNRGLGGFVAIDKIKAVLESRCPGIVSCADILHLATRDAVQLAGGPGYPVLTGRKDGMKSDAASVDLPSPSVSLQKVLDYFKSRNLNVVDMTTLLGAHTVGRTHCSFIVDRLYNYNGSGKPDPSMSATLLESLRKVCPPRKKGQADPLVYLNPQSGSRYNFTESCYRRILSHEAVLGVDQQLLNSDDTKQITEEFAAGFEDFRKSFATSMYKMGNYRVLTGNQGEIRRYCRYTNKGLIN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04104 335 Gene3D Peroxidase, domain 2 164 309 - -
Pumo4g04104 335 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Pumo4g04104 335 Gene3D - 34 330 - -
Pumo4g04104 335 FunFam Peroxidase 164 309 - -
Pumo4g04104 335 PANTHER PEROXIDASE 25-RELATED 13 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Pumo4g04104 335 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 SUPERFAMILY Heme-dependent peroxidases 37 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 Pfam Peroxidase 48 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g04104 335 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04104 Pumo-Chr4 81730910 81732441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04104 5 330 Peroxidase AT5G24070 65.455 9.55e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04104 K00430 - gmx:100797875 608.601