Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04099 ATGCCGAAGCAAATTCATGAGATTAAAGACTTCCTCCTCACTGCAAGGAGGAAGGATGCACGGTCTGTGAAAATCAAGCGGAGCAAAGATGTGGTGAAGTTCAAGGTCCGTTGCTCCAAGTACCTGTACACCCTCTGTGTGTTTGACTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTAAGCGTGCAGGACGTGTGA 210 0.4762 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDV 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04099 69 FunFam 60S ribosomal protein L38 1 69 - -
Pumo4g04099 69 Gene3D - 1 69 IPR038464 -
Pumo4g04099 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pumo4g04099 69 Pfam Ribosomal L38e protein family 2 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04099 Pumo-Chr4 81684330 81685873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04099 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 5.73e-44 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04099 K02923 - gmx:100500171 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04099 4 81684330 81685873 Pumo4g04099 4 81684330 81685873 ECH