Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04094 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTGCCACCTCCATCGGGACGTTATTCTGGTTACTCACCCACCGGAAGCGTTTTTAATGTGAAATCTGAGCTGTCCCCGTCGTCGTCGTCGACGACGTCGTATCCGCCACTGGCTCCGGGAACCACCAGCTCGGAGTCTAGTCACTTTGGACATGGAATGTCCACGGATTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCTGATAATCCCCCTAGAAACAGAGGCCATAGGCGTGCTCATTCGGAGATTCTCACATTACCGGATGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCCGATGGGCCTTCGTTCTCGGACGACGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCAACGTCATCGTTTCAAATGGGCGAGCCGTCTAATGCCACGGGAGGGTTGGCTTCGACACCAGCATCAGGGGCGCCCACCTCTTCTGCAGAGAATGTTGTTATTGGGAGTAATGAAAGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGACGGGTCAACCACCATCAAGCCTGAGATGCTGGTCTCGGGTTCGGAGGACATGTCTGCGGCTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGATACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGCAGAGAGATACAAATGGCTTGAATTCTGAGAACAGTGAACTGAAGCTACGGTTGCAAACAATGGAGCAACAAGTTCACTTGCAAGATGCATTAAACGACGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGGCAAGCTATGCCACCTAATGGAGGACCCATGATGAACTTTGCTTCTTTTGGAGGGGGACAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTTTAGCAGCACAGCAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCAGCAGCATCAGTTTCAGCAGCTTCAGCAACAACAAATGCTGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAACAGCAGCACCAACAATCAAGCGACTTGAAAATGAGAGAAGCTACACCTACTTCATGCCCCAAAGACAATGCTTCGTCAGATGTAAATCCTTCTGGGGCCAAGGATTCTTGA 1311 0.4882 MDKDKSLGHGGGLPPPSGRYSGYSPTGSVFNVKSELSPSSSSTTSYPPLAPGTTSSESSHFGHGMSTDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDAEEDLLSMYLDMDKFNSSSATSSFQMGEPSNATGGLASTPASGAPTSSAENVVIGSNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGPMMNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQHQFQQLQQQQMLQQQQQQQQREQQHQQSSDLKMREATPTSCPKDNASSDVNPSGAKDS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04094 436 SMART brlzneu 230 295 IPR004827 GO:0003700|GO:0006355
Pumo4g04094 436 CDD bZIP_plant_RF2 235 284 IPR044759 GO:0003700|GO:0006355
Pumo4g04094 436 MobiDBLite consensus disorder prediction 21 76 - -
Pumo4g04094 436 Coils Coil 250 284 - -
Pumo4g04094 436 MobiDBLite consensus disorder prediction 391 436 - -
Pumo4g04094 436 MobiDBLite consensus disorder prediction 141 177 - -
Pumo4g04094 436 Coils Coil 286 320 - -
Pumo4g04094 436 Pfam bZIP transcription factor 234 282 IPR004827 GO:0003700|GO:0006355
Pumo4g04094 436 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 37 405 - -
Pumo4g04094 436 Gene3D - 233 288 - -
Pumo4g04094 436 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 232 296 IPR004827 GO:0003700|GO:0006355
Pumo4g04094 436 MobiDBLite consensus disorder prediction 80 97 - -
Pumo4g04094 436 SUPERFAMILY Leucine zipper domain 234 283 IPR046347 GO:0003700|GO:0006355
Pumo4g04094 436 FunFam probable transcription factor PosF21 233 287 - -
Pumo4g04094 436 MobiDBLite consensus disorder prediction 141 198 - -
Pumo4g04094 436 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04094 Pumo-Chr4 81635258 81638258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04094 19 364 bZIP Transcription Factor Family AT1G06070 71.839 3.81e-170 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g04094 bZIP_1 6.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04094 - - gmx:100786738 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04094 4 81635258 81638258 Pumo4g04094 4 81635258 81638258 ECH
Pumo4g04094 4 81635258 81638258 Pumo11g01704 11 48670386 48673901 PCT