Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04085 ATGGAGTTTGGGATTGATGGCTCCATTAATGGTGAGACAGTAGGAAATGCTACTATAGTGCAGATTAATATCAGCACAGCTGATGAAAACAAAGTAGGCTGCAGTTCTTTTAATCCTGCTTATAAACAAGATCGTGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCGGTTGCGTCAGCTGATGAGCCCTATGTGGGCCAGGAGTTTGAATCCGAAGCTGCAGCACATGCATTCTATAATGCATACTCTACACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGAACTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAGAGTAAGCTCTGGTAAATGGGTTGTTACAAAGTTTATAAAGGAACACACACATCCTTTGACACCTGGAAAAGGTAGAAGGGATTGCATTTATGAGCAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTATAGAGAAAAAGCGATCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCACATTGAAGAGCATAATGATAGTCTTTCAAAGAAAATACAACACATAGTGGACAGTGTGAAGGAGATGGAAACCAAAGAAGAACAGAGTCAGAGATAG 762 0.4134 MEFGIDGSINGETVGNATIVQINISTADENKVGCSSFNPAYKQDRDDNITQDSSGGDTIPSGIPAVSVASADEPYVGQEFESEAAAHAFYNAYSTRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRRVSSGKWVVTKFIKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNDSLSKKIQHIVDSVKEMETKEEQSQR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04085 253 Pfam FAR1 DNA-binding domain 89 175 IPR004330 -
Pumo4g04085 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 249 - -
Pumo4g04085 253 MobiDBLite consensus disorder prediction 38 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04085 Pumo-Chr4 81559433 81562622 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo4g04085 FAR1 1.5e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04085 - - gmx:100806900 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04085 4 81559433 81562622 Pumo4g04085 4 81559433 81562622 ECH