Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04063 ATGGATCCAGAAAGATCAGTAGAGGACCAGTTCTCCAAGCTACACCCTTCCATGCCAGTAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGCCAGGCTTGGTTATAATAATATCACTGTCTTAGAGAAACATCATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTATATGATCTAGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTGGCAAAAGAGACAGGCTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCTGGAAAATACCAAGATGTTAAAGTTGCTGATGATTACGTTTCTGTTATGTCACTTACATTACAAATCCAAGAAAAGGTGAAGAATTCTGGTAGTTTTGGGGTTCATGCTGTCAGTGAAGTTGCTTCAGACTTGACTCCAGATTATCTTGAGCGTCATGGACTTAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAGGTGTTGTCAATCAGGCGGAACTCTGACATTGTCACTGTTAATGTCAAGGGCTCAAATGAAACTATGGAATTTGATAAAATCATAATCTCGGGTAACTTTCCATTAAAATATGGAAGAACTTATAGATCAGTGCCTTCAACTTGCTTAGAGTGTGAAACAGAAGTAATGGATGTAAGTGAGCTTGAAAAGGATTTGTTCAGCAAAGTAGAAACCAATGACTACTACACAACTGTTTTAAAGATCAAACGGCTGGAACATATGCCTGTTGGATTTTATTATTTTAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAATCAACAGAATCCATGGGGGGAGAAGTTGAGAATTTCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAGGGCTCAAGGAATACTTATTATGTTGGCGGACTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCAAATAGTAGTGATTTGCCAGTGTTTCCCTACACTAAGAGTTTGTTTCCCTTGCAAACAGAGTTCCGGAAAAAGGAGCCTAAAGAACTAGGTGAATTGCCTGGAGTGCAATTTCCCAATTTGCCTACTTTGAATGGCTATTTAAAGCACTGGGGAATTCATCCAGTCACTCAAAACAGAACTCTTTATACTTGGATAAATGAAGGAGGCACAGTGGTTGGCAAGAGGACATATGGAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCAGTTATCAAGCCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGTCTTGATTTCATTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTTCCAGTTCTTCCCCCAGACCCCATGCAGAGAGGTGGACAAGCACTTCTGAAAATTGAGAACATTGCCAAGTCATGCGGCATAGTGGCAATTTTATCAACAGTATCTTATCACTCAGCAGTACGTGCAGGTCTAGTGAAAAGTTTGATCTCATTAACTGGAAAAAATGGGAAATCCACAGCTCAATGGCCAAAACTTGCATGGCTGCACACTGATACTTGGGTCAATAACTCAAGAAATTTGGCCGTGGAAGATGTAGATGGTCAATGTGAATCCCAGCCTGGTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCATTCACAATGTGAAGTTGATGAAAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTATTTACAGCTCTTGTTAGTGGTGGATCTGCCGTGCTGTTTTCACCATTGACATTTATTAAGAAACCACTCTTATGGCTTGAAACTATCAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGAGTCTGAGAAAGACAAGCTTCAGAATTTAGACCTTTCATCCATGATTTTCCTTATGGTTGCTGCTGAGCCAGTGAGGATGAAGACCTTGAAAAGATTTCTTGATTTAACCGCTCCTTTTGGCTTATCTCAAAAGGTGCTGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTGAGTTGTGCATTTGGAGAAGGATGTCCCATTCTTGTTGATTGGCAAGGAAGAGTTTGTTGTGGATATATTCACCCAGGTGATGCAGATGTTGACATTAGAATAGTTGATCCAGACAGTGGTGAAGAGCTTGAGGAAGATGGAAGGGAAGGAGAAATCTGGATAAGTTGTCCAAGTGCAGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAAAACCATCCTGGACGTAACTACACAAGAACTGGAGACTTGGGAAGAATTATAGATGGGAAGCTATTCATCACTGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAGACAGTTGAGAGTTCATCTGAATTTATTCGTCCTGGATGCTGTGCAGTCATTGGTGTCCCTGAGGAAGTTTTATCAGCAAAGGGGATTGCCTTGCCTGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAGCAGTTAGCAAAGATGTGATTGAGCATATTCAGACTCGTGTGGTAGAAGAACATGGAGTGAGTGTTGCTTCTATCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAAAGATTTGAGTGTCTCAAACAGTTTGCAGATGAAACACTAAGCTTGGTGCCACAACCTTTGACTAAGAAATCACTGCTAAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCCAGGGCACAGCTGGTGAGAAGTAGTACACCTCAACCTATTCCAAGAATCAGTAACAAGGAAATTGTGGAGCACTTGAAAAGGCTTATTTCTGAGCAGTCTGGAATCCCAGTCAACAATATCTCTGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTCAAAGCAACTCAAAAACTCACAGATTTCCTGGGAGTGCCAGTTGCAGCTATAGATGTTTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCTGAGAATCTTCTACTCAAGTCTCAACCTCAACTTATGAGCAATTCATCACATGCTCCAGAAGCTGAAATTGACTCTATAGAAGTGGATGTGGATGTGTCCAAATCTCGCCAATGGGGTATCCGCTTACTTCAACTTCTAGCACTTATTTATATCTCTATCATGTTGGTCTCTCCTGCTTATCTATCCATTACTGCTTTTCAAAGTTTCATGCCAAATGTCAGTGAATCGGTACATGGAATGCCTTGGTCAAGCTATTTGATTTCCTTGACTTTGGCACCACTTTCTTGGATCCTTTGCATAGTTTCTACTTGCATTTGCATTTCCTTTTTTGGGAATTCTTTCTTGAGGCCAAACTATGCCCTTACACCCGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAACTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTATTTCTGAAATACTGGTTTGAGATGCTCGGTGCAAGAATTGGATCCTTAGTTTTGTTTGACACAGTGGATATCACAGACCCGTCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTTTCCTTCCTATTAGGATAGGTAAAAATTCTTCAATTGGACCTTATTCTATTATTCAAAAAGGAAGTGTTATCAAAGAAGGATCTGAAGTAAATCCCCTGCAAAAGGTTGAAGGAGGCCAACATGTGCTCAAACCTGCTAAACTTAATAACGTTAAAGAGAATGCAGTGTTGCTTGTTACTACCAGCAAAACTCAGTCCAATGCCATGTACCATTTTCTGGGGATCTATCTCACTGGCTTTCTCAGCTCCCTTGCTGCAGCTATTGCTTACATCCTGTACATAAGGTTCTTCCAGATACCTGCATCATTCCAACACTTCTCATTTCTTTGCATATGTGGGGCCTTCCACTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTACTATTTCATTTACCAGTGCATACTTGCTTCATGGCCTCATACTCACCTCTCTCACATGTGCTTTGACCCGTTTGCTCAAATTCAATCAAAACCAAACCCATTATAAAACCTGGCTTAGACAACGATTGACCATTTCCTGCCACCATAGATTTGCAAAGCTTCTCTCCGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAACATTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCTGAGTTAATGTCAATAGGTGATGGTGTCCATCTTGGTGATTTCAGCAAGATAATCACCGGTTTTCATTATTCCAATGGATATGCTTGTGGAAAAATAGAAGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAAAATGTCATTCTAGGTGCACTTTCAATTGCTCCAATGAATTCTATCCTCCATGAGGGTAGCGTGTATATTGGATCTCAAACCCGAGTTGCAACCAGAAACTCTTCACATGATTTAGATGAAAGAATAGAGGAGATGGACATGGAGTACAAAAAAGTAGTTGCAAATATGGCTGCAAATTTAGCTGTCACGACTATTAATGTTAAAGCAAGATACTTCCACCGCATTGGTGTTAGTGGAAAGGGACACTTGAAAATCTATGACAAAGTTGATGGCATTCCACTGCACAAGATTTTTCAGCCTGGAAAAAGCTACCCTATCATGGTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGATGCACCAGATTCTAACCATGTTCCCCTCATTGACCTGACACTAAAAACTGGCAAGGCGTTTTATGCTCGCACTCTTGCTGATTTTGCAACCTGGCTTGTGTGTGGACTTCCTGCGAGGGAGGAACTTGTTAAGCGTACCCCACATGTTCGTGAAGCAGTGTGGAATTCCCTTAGAAATGCACACTCATATGCTGAATTGCACTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGACCTATTGACAGGAGCATTAGTGAGGACACAGGTAAGGTTGAACCAACTGGGATTCTTCCACCAGAAACAGGTGCAATTCCTAGGGATGAAAAGGACACACGTCCGTTACTTTTCCTTGCTGAAGATTTTCAACGGCGTGTGAATTCCCCTGGTGGAGTTCTTTATGTCTTCCAAGTGCAACTTCGAGCAGTGCCAGAAGATGAAGCCACACGTGATGTCGCACTGGACTGCACCAAACCATGGGATGAAAATGATTTCCCATACATTGATGTTGGAGAGATAAGCATCAATGAGAATCTTTCTAGGGAAGAATCAGATAGGCTTGAATTTAACCCCTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCCACTTCCAACACGCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCACTCATCATTGCCCAAAAAGGAGACAAAAAAAGTGACAACCTTAACCTTGACAAGAACCTGGTACCAGACCTTCTCAGCACTTTTCACTCAACCGTTGTTACAAACGGTTTTGCCTTACACGGTGGTGGGATTGGCTGTTTTTGCTCCTTTGAACTTTGTTGTTAACCTTAAGAACGTTGAGAAAGTCCCAGTGCAATGGTTGCTTCCTTTGTTTTGGGTTCTCTCAGGTGTTATGGCTGCACTGGCATGTGTTGTGGCCAAATGGGTTCTCGTGGGAAGGAAGAAAGACGGTGAAACGGCACCCATATGGAGCAAAAGGGTTGTCATGGATAGCACGTGGCAAGCGATTAGAACTTTGGTTGGGGACTACTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAAGTTGATGGGTGCGGACATAGACATGGATGGTTACGTGGACAGCATGGGGGCTTTGTTGAACCCCGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGAGGAATCAAAATTGGTGAAGATGGGTTTGTGGGGAGTAGAGCCGTTGTTATGCCTGGTGTGCATGTGGAGACCGAGGCCAGTCTTTCTGCCTTGTCTCTCGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 6867 0.4211 MDPERSVEDQFSKLHPSMPVNTRIGIVGAGPSGLSAAYALARLGYNNITVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSPLEEMDSHKLAVIDSSSGKYQDVKVADDYVSVMSLTLQIQEKVKNSGSFGVHAVSEVASDLTPDYLERHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVLSIRRNSDIVTVNVKGSNETMEFDKIIISGNFPLKYGRTYRSVPSTCLECETEVMDVSELEKDLFSKVETNDYYTTVLKIKRLEHMPVGFYYFSEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVTELAIKSTESMGGEVENFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSSDLPVFPYTKSLFPLQTEFRKKEPKELGELPGVQFPNLPTLNGYLKHWGIHPVTQNRTLYTWINEGGTVVGKRTYGEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVSYHSAVRAGLVKSLISLTGKNGKSTAQWPKLAWLHTDTWVNNSRNLAVEDVDGQCESQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPLTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESEKDKLQNLDLSSMIFLMVAAEPVRMKTLKRFLDLTAPFGLSQKVLAPGYGLAENCVFVSCAFGEGCPILVDWQGRVCCGYIHPGDADVDIRIVDPDSGEELEEDGREGEIWISCPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFIRPGCCAVIGVPEEVLSAKGIALPDGSDQVGLVVVAEVRDGKAVSKDVIEHIQTRVVEEHGVSVASIKLIKPRTISKTTSGKIKRFECLKQFADETLSLVPQPLTKKSLLRSFTTGTCREGRTPRAQLVRSSTPQPIPRISNKEIVEHLKRLISEQSGIPVNNISVTDNMSTYGIDSIGVVKATQKLTDFLGVPVAAIDVFTASCIQELANFSENLLLKSQPQLMSNSSHAPEAEIDSIEVDVDVSKSRQWGIRLLQLLALIYISIMLVSPAYLSITAFQSFMPNVSESVHGMPWSSYLISLTLAPLSWILCIVSTCICISFFGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLFDTVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSFLPIRIGKNSSIGPYSIIQKGSVIKEGSEVNPLQKVEGGQHVLKPAKLNNVKENAVLLVTTSKTQSNAMYHFLGIYLTGFLSSLAAAIAYILYIRFFQIPASFQHFSFLCICGAFHWIPFTIVAYATMFSDVPSNPIAFTISFTSAYLLHGLILTSLTCALTRLLKFNQNQTHYKTWLRQRLTISCHHRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKIEVQDNSVVGSQSLILPGSVVEKNVILGALSIAPMNSILHEGSVYIGSQTRVATRNSSHDLDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKVDGIPLHKIFQPGKSYPIMVRHSNSLSADDDARIDARGAALRILSDAPDSNHVPLIDLTLKTGKAFYARTLADFATWLVCGLPAREELVKRTPHVREAVWNSLRNAHSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDRSISEDTGKVEPTGILPPETGAIPRDEKDTRPLLFLAEDFQRRVNSPGGVLYVFQVQLRAVPEDEATRDVALDCTKPWDENDFPYIDVGEISINENLSREESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHSSLPKKETKKVTTLTLTRTWYQTFSALFTQPLLQTVLPYTVVGLAVFAPLNFVVNLKNVEKVPVQWLLPLFWVLSGVMAALACVVAKWVLVGRKKDGETAPIWSKRVVMDSTWQAIRTLVGDYFMDMASGSFLFVMWMKLMGADIDMDGYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVHVETEASLSALSLAMKGEIVRSR 2288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04063 2288 Pfam Phosphopantetheine attachment site 1125 1188 IPR009081 -
Pumo4g04063 2288 Gene3D - 1108 1192 IPR036736 -
Pumo4g04063 2288 ProSitePatterns Phosphopantetheine attachment site. 1148 1163 IPR006162 -
Pumo4g04063 2288 SUPERFAMILY Heme-dependent catalase-like 1743 2052 IPR020835 GO:0020037
Pumo4g04063 2288 Gene3D Hexapeptide repeat proteins 1356 1470 - -
Pumo4g04063 2288 Gene3D - 94 202 - -
Pumo4g04063 2288 Gene3D - 951 1079 IPR045851 -
Pumo4g04063 2288 Pfam Flavin containing amine oxidoreductase 32 263 IPR002937 GO:0016491
Pumo4g04063 2288 Gene3D - 480 950 IPR042099 -
Pumo4g04063 2288 Pfam AMP-binding enzyme 523 956 IPR000873 -
Pumo4g04063 2288 ProSiteProfiles Carrier protein (CP) domain profile. 1119 1193 IPR009081 -
Pumo4g04063 2288 PRINTS Adrenodoxin reductase family signature 47 60 - -
Pumo4g04063 2288 PRINTS Adrenodoxin reductase family signature 23 45 - -
Pumo4g04063 2288 SUPERFAMILY Trimeric LpxA-like enzymes 1355 1431 IPR011004 -
Pumo4g04063 2288 ProSiteProfiles catalase family profile. 1682 2288 IPR018028 GO:0004096|GO:0006979|GO:0020037
Pumo4g04063 2288 SUPERFAMILY Trimeric LpxA-like enzymes 2148 2281 IPR011004 -
Pumo4g04063 2288 SUPERFAMILY Acetyl-CoA synthetase-like 502 1074 - -
Pumo4g04063 2288 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 2048 - -
Pumo4g04063 2288 SUPERFAMILY ACP-like 1116 1199 IPR036736 -
Pumo4g04063 2288 CDD FAAL 507 1070 IPR040097 GO:0008610
Pumo4g04063 2288 ProSitePatterns Putative AMP-binding domain signature. 678 689 IPR020845 -
Pumo4g04063 2288 Gene3D Catalase core domain 1710 2065 - -
Pumo4g04063 2288 Gene3D - 301 394 - -
Pumo4g04063 2288 Gene3D - 23 444 IPR036188 -
Pumo4g04063 2288 SUPERFAMILY Trimeric LpxA-like enzymes 1593 1727 IPR011004 -
Pumo4g04063 2288 SUPERFAMILY FAD/NAD(P)-binding domain 18 269 IPR036188 -
Pumo4g04063 2288 Gene3D Hexapeptide repeat proteins 1564 1709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04063 Pumo-Chr4 81293881 81301607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04063 674 989 Monolignol Biosynthesis Gene Families AT1G20480 27.129 8.48e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04063 - - gsj:114374875 3711.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04063 4 81293881 81301607 Pumo4g04063 4 81293881 81301607 ECH
Pumo4g04063 4 81293881 81301607 Pumo11g01677 11 48141718 48151167 PCT