Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04053 ATGCCTGAGACCCTCTTTCTTACCGTAAATATAATTGATCGATACCTCTCATCAGCAACTGTGCCTAAACAAGAATTGCAGTTGTTGGGCATTAGCTCAATGCTCATAGCGTGCAAATATGAAGAGATATTGTCTCCTCAGGTAGGTAGCACAAACTGA 159 0.4151 MPETLFLTVNIIDRYLSSATVPKQELQLLGISSMLIACKYEEILSPQVGSTN 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04053 52 Gene3D - 1 49 - -
Pumo4g04053 52 PANTHER CYCLINS 1 46 IPR039361 -
Pumo4g04053 52 SUPERFAMILY Cyclin-like 2 48 IPR036915 -
Pumo4g04053 52 Pfam Cyclin, N-terminal domain 2 48 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04053 Pumo-Chr4 81229874 81230032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04053 2 50 Core Cell Cycle Gene Families AT3G11520 69.388 7.35e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04053 K21777 - rvl:131312523 79.3369