Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04038 ATGACATTTATTCTTAAATTAGCTATGACTTTATCTTTAAACAGTTTAGTATTTAAATTTCTTTGGTACAGGAAAGTTGAAAAAAAGATGGACCATGACAAGACTGGTTGCCAAGCTCCCCCAGAAGGTCCTATATTGTGCATCAACAACTGCGGATTTTTTGGAAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTAAAACAGGAGCAGGCAAAGCTTGTAGCATCATCCATTGGGAATATTATGAATGGGTCATCAAGCAGCAGTGGAAATGAACCTGCCATTGCTACCAGTGTGGATGTTTCAGTCAATTCCATAGAGCCTAAAATTATCCCTGCACAACCTTTAGTTGCTTCAGGTTCAGAGGAGAGTGATGAGGTGAAGCCCAAGGATGGTCCAAAACGATGCAGCAACTGCAATAAGCGGGTTGGTTTGACAGGATTTAATTGTCGATGTGGTAACCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTGCTGCAAGGGATGCCATAGCTAAAGCAAACCCGGTTGTCAAGGCTGAGAAACTTGATAAGATCTAG 606 0.4191 MTFILKLAMTLSLNSLVFKFLWYRKVEKKMDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLVASSIGNIMNGSSSSSGNEPAIATSVDVSVNSIEPKIIPAQPLVASGSEESDEVKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04038 201 Gene3D - 29 99 - -
Pumo4g04038 201 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 46 82 - -
Pumo4g04038 201 SUPERFAMILY AN1-like Zinc finger 125 196 IPR035896 -
Pumo4g04038 201 SMART AN1_Zf_4 142 179 IPR000058 GO:0008270
Pumo4g04038 201 Gene3D - 121 197 IPR035896 -
Pumo4g04038 201 Pfam A20-like zinc finger 45 68 IPR002653 GO:0003677|GO:0008270
Pumo4g04038 201 FunFam Zinc finger AN1-type containing 6 119 197 - -
Pumo4g04038 201 Pfam AN1-like Zinc finger 142 178 IPR000058 GO:0008270
Pumo4g04038 201 PANTHER AN1-TYPE ZINC FINGER PROTEIN 42 201 - -
Pumo4g04038 201 ProSiteProfiles Zinc finger A20-type profile. 41 75 IPR002653 GO:0003677|GO:0008270
Pumo4g04038 201 ProSiteProfiles Zinc finger AN1-type profile. 136 182 IPR000058 GO:0008270
Pumo4g04038 201 SMART A20_3 44 68 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04038 Pumo-Chr4 81067222 81068800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04038 37 201 C2H2 Transcription Factor Family AT3G52800 42.262 5.52e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04038 - - gmx:100781607 324.324