Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04033 ATGGTCCAACGTGAAGAAGTCTTGTGCAAACAAGTCAACGTCAGAAATTTCCATGAAAGCTTAATCTCCATTTATAGTAATTCTAAGTACTCAACTACTCAAGCAATGATGGTTGATAAACGACAGTACCCAACGATCGAACAAAAGTTTGCGGGCCAGCTTCACTTGAGATCCAACTCCAACCTTTCCCCACATGTTGGAACTTGTTACGGAGGTTTGAAAAGGCCAGCTCTGTTTCAGCAACGATTTTCACTAGAAAACTATTCAAATGCAGGGTTGCAGTGCCCTGTCATGCCTTCATGCAAACCCAAAAGCGATTTGTATTCTGCAGTGTTTGTCCCATCGCCGTCAGAGAAAAACTTTGCAAGCTTTGCCACTGATTTTCTCATGGGTGGAGTTTCTGCAGCAGTGTCCAAGACTGCAGCTGCTCCTATTGAGCGTGTAAAGCTTCTCATTCAAAATCAAGATGAGATGATCAAGGCCGGTCGGCTCTCTGAACCCTACAAGGGCATTGGAGATTGCTTTGGCAGAACAAGTCAAAGACGAGGGGTTTGTTTCATTGTGGAGAGGGAACAATGCCAACGTCATCCGTTACTTCCCAACACAGGACCACCACGTGTCTATAATTGTAGTCAATCTCCTTGTGACATCAAGCTAAAATTTTCAATTTACATGCAAGAATTAGCCCTGAACTTTGCATTTAAAGACTACTTTAAGAAGCTATTTAACTTCAAGAAAGACAGGGATGGGTACTGGAAATGGTTTGCTGGGAACGTAGCATCTGGTGCTGCAGCAGGAGCTTCATCCTCAGTGTTTGTTTATTCATTGGATTACGCTCGAACCCGCCTTGCCAATGATGCCAAGGCTGGAAAGAAGGGTGGAGAGAGGCAATTCAATGGTTTGGTCGATGTCTACAGGAAGACTCTTCAATCGGACGGTGTTGCTGGCCTCTACCGTGGCTTCAACGTTTCTTGTGTTGGAATCATTGTCTACCGTGGTTTGTACTTTGGAATGTATGATTCTCTCAAACCAGTGCTCTTGGTGGGAACTTTTCAGGATAGTTTCTTGGCTAGCTTTGCTCTGGGGTGGATTGTTACTATTGGTGCTAGCATTGCCTCGTACCCCTTAGATACCGTTCGCAGAAGAATGATGATGACATCTGGTGAAGCTGTTAAGTACAAGAGCTCTTTTGATGCATTCTCACAAATTGTGAAGAATGAAGGTTCAAAATCTCTCTTCAAGGGCGCGGGAGCAAATATTCTTCGTGCAGTTGCTGGTGCTGGCGTGCTTGCTGGTTATGACAAACTTCAGGTACTTGTCCTGGGAAAGAAGTATGGTTCCGGTGGGGCTTAA 1353 0.4472 MVQREEVLCKQVNVRNFHESLISIYSNSKYSTTQAMMVDKRQYPTIEQKFAGQLHLRSNSNLSPHVGTCYGGLKRPALFQQRFSLENYSNAGLQCPVMPSCKPKSDLYSAVFVPSPSEKNFASFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTSQRRGVCFIVEREQCQRHPLLPNTGPPRVYNCSQSPCDIKLKFSIYMQELALNFAFKDYFKKLFNFKKDRDGYWKWFAGNVASGAAAGASSSVFVYSLDYARTRLANDAKAGKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVLLVGTFQDSFLASFALGWIVTIGASIASYPLDTVRRRMMMTSGEAVKYKSSFDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04033 450 SUPERFAMILY Mitochondrial carrier 120 184 IPR023395 -
Pumo4g04033 450 PRINTS Adenine nucleotide translocator signature 253 266 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g04033 450 PRINTS Adenine nucleotide translocator signature 124 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g04033 450 PRINTS Adenine nucleotide translocator signature 168 189 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g04033 450 PRINTS Adenine nucleotide translocator signature 227 239 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g04033 450 PRINTS Adenine nucleotide translocator signature 358 374 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g04033 450 ProSiteProfiles Solute carrier (Solcar) repeat profile. 353 439 IPR018108 -
Pumo4g04033 450 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 345 IPR018108 -
Pumo4g04033 450 FunFam Uncharacterized protein 294 439 - -
Pumo4g04033 450 SUPERFAMILY Mitochondrial carrier 224 435 IPR023395 -
Pumo4g04033 450 Gene3D Mitochondrial carrier domain 125 446 IPR023395 -
Pumo4g04033 450 PRINTS Mitochondrial carrier protein signature 362 384 IPR002067 GO:0055085
Pumo4g04033 450 PRINTS Mitochondrial carrier protein signature 318 336 IPR002067 GO:0055085
Pumo4g04033 450 PRINTS Mitochondrial carrier protein signature 140 154 IPR002067 GO:0055085
Pumo4g04033 450 PRINTS Mitochondrial carrier protein signature 127 140 IPR002067 GO:0055085
Pumo4g04033 450 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 117 449 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo4g04033 450 Pfam Mitochondrial carrier protein 123 184 IPR018108 -
Pumo4g04033 450 Pfam Mitochondrial carrier protein 252 346 IPR018108 -
Pumo4g04033 450 Pfam Mitochondrial carrier protein 353 440 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04033 Pumo-Chr4 81021942 81025038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04033 37 450 Antiporters AT5G13490 66.506 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04033 K05863 - gmx:100800843 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04033 4 81021942 81025038 Pumo4g04033 4 81021942 81025038 ECH