Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04027 ATGGAGTACTCTGTGGAAGCTTTGAGAAGAGATCTTAGGAACATGAGGAAGTACTACGGCAGTGGAAAAACAAAGGAAGCATCATGGAGACAATCTCAGCTTAAAGGGTTGCACAATTTTCTCGTGGAAAAAGAGGAAGAAATTTTGAGGGCCCTCAAGCATGATTTGGGGAAGCATCATGTAGAGTCTTTTAGAGACGAGGTTGGAACATTAATGAAGACCTTAAACTTAGCAACCAAGTCTTTGAAAAATTGGATGGCGGGCAAAGAGTACATAGCGGATACCCTACCATTTGGAGGAGTTGGTGAATGTGGGTTTGGCAAGTACCATGGGAAGTTCTCTTTTGACGCGTTCAGTCACCATAAGGCTGTGGCTAGAAGAAGTTACTTGACTGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGAGTCTTACAATTTAGACTACCTTGGAATACTTCTAGTTCTGCTCGGCTTAAAGAAATCAAAAAGATCATTATATCAGGCTTGTAATTGA 537 0.4153 MEYSVEALRRDLRNMRKYYGSGKTKEASWRQSQLKGLHNFLVEKEEEILRALKHDLGKHHVESFRDEVGTLMKTLNLATKSLKNWMAGKEYIADTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYLTDFWFRFPPWTLNKLQLLEESYNLDYLGILLVLLGLKKSKRSLYQACN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04027 178 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 90 152 IPR016162 GO:0016491
Pumo4g04027 178 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 89 IPR016162 GO:0016491
Pumo4g04027 178 SUPERFAMILY ALDH-like 4 88 IPR016161 GO:0016491
Pumo4g04027 178 SUPERFAMILY ALDH-like 94 147 IPR016161 GO:0016491
Pumo4g04027 178 PANTHER ALDEHYDE DEHYDROGENASE 91 160 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04027 Pumo-Chr4 80965512 80968287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04027 1 89 Aldehyde Dehydrogenase Gene Family AT4G36250 37.079 8.83e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04027 K00128 - gmx:100798020 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04027 4 80965512 80968287 Pumo4g04027 4 80965512 80968287 ECH
Pumo4g04027 4 80965512 80968287 Pumo11g01648 11 47773661 47777178 PCT