Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04010 ATGAGAGAACAAAGCTTTGGAGATAAGATGATGCATGGAATAACAACTCTCCCTCTCACTTCAAACACCTTCCTTTGTTGTTCTCACACTCACCGATCTCTTCTACCAACTTGTTACATACCCACTTCCACTTGTAGAATTAGCTATGGAATTCGTTTCAACCATTCTCAATGGAAGCACCAAAAAACAGAAAGATGGACCAATAGAATCATGGTAGTGAGAGCAAGGCGTAGCGAGTCGCCGTACGATGTTTTGGGTGTGTCTCCATCCGCTACTGTCGACGATATCAAAAAGGCGTATCGGAAACTTGCTCTCAAGTATCATCCCGATGTTAATAAAGAGGATAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACCTTGCTAAATTCTAGTTCCCGTAAAAAATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCGAAGTAGGGATGCACAAGCTGAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAACTGGGAAGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACTGATCAAAATGACGATTATAAAACACCTCAGGGAGGAAATGCATCCAACTTTTCTGGGACAGAGACACCAAGCAATAGCAGTCAAGGTGAAGCTAACAAGGGAAACAGAAGCGTTGTGGATAACCTTGAGGAAATAGAAGCCACTCTGGCTCAGTTGAAAAAGGAATTAGGCTTATAG 858 0.4068 MREQSFGDKMMHGITTLPLTSNTFLCCSHTHRSLLPTCYIPTSTCRISYGIRFNHSQWKHQKTERWTNRIMVVRARRSESPYDVLGVSPSATVDDIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRKKYDSGSRGYDFSQGSRSRDAQAEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDQNDDYKTPQGGNASNFSGTETPSNSSQGEANKGNRSVVDNLEEIEATLAQLKKELGL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04010 285 Coils Coil 262 282 - -
Pumo4g04010 285 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Pumo4g04010 285 MobiDBLite consensus disorder prediction 227 266 - -
Pumo4g04010 285 FunFam Chaperone DnaJ-domain superfamily protein 77 198 - -
Pumo4g04010 285 SUPERFAMILY Chaperone J-domain 16 140 IPR036869 -
Pumo4g04010 285 SMART dnaj_3 79 136 IPR001623 -
Pumo4g04010 285 Pfam DnaJ domain 81 141 IPR001623 -
Pumo4g04010 285 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Pumo4g04010 285 Gene3D DnaJ domain 77 198 IPR036869 -
Pumo4g04010 285 PRINTS DnaJ domain signature 82 100 IPR001623 -
Pumo4g04010 285 PRINTS DnaJ domain signature 116 136 IPR001623 -
Pumo4g04010 285 PRINTS DnaJ domain signature 100 115 IPR001623 -
Pumo4g04010 285 MobiDBLite consensus disorder prediction 230 262 - -
Pumo4g04010 285 CDD DnaJ 81 133 IPR001623 -
Pumo4g04010 285 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 41 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04010 Pumo-Chr4 80815395 80819487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04010 82 142 C2H2 Transcription Factor Family AT1G74250 38.806 5.00e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04010 4 80815395 80819487 Pumo4g04010 4 80815395 80819487 ECH