Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03998 ATGTGTTATGACCCTCTGAGCCTTCAACACACTGAGAAATCATTCTCTGAGGCTTTGGAATTGGAACCATCACTTCCTCTTTCCCCTAATCAGCACCCACTTGAGAGCCCTGATGGGAATTCTTCTAATTCCACTAGTGATTCTGCCAATTCTCATGATTTGAAGCCTTCTTCACCTAATACACCCGTTTCTGGTGGTGGTGGGGGTGATGTTTTGCATTCCTCTTCCCACACGCCCTCTTTGGTTGTTCCTCCACATGCTTTGACTAAAATTAATGATGGAACTGTGGATTTGGATTTTTCTGTAACCAAGCTCTTGGCTGAAAATATTTTCAGTGATGCAGACTCTATGTTGCAGTTTAAAAGAGGGTTGGAGGAGGCTAGTAAGTTTCTTCCTCAAAGACCTCAGCTTTTCACTGGGTTGGAGAGCACCTCGGTGTCTGCAGAGCCAAAGGGAAGAGTGGTAGCTGTGAAGATGGAGAATTCAATTGGGGTGAAGAGTAGAAAGAATCATGCACGCCAAGATGAAGAAGAAGAAAGAAGCAACAAGCAGTCTGCTGTGTCTGCGGTTTGTGCTGAGGAGGAGAGTGAAATATCTGAAATATTTGACAAGGTGTTGCTTAGTGTTGAAAATGTGCCACTGTGTGCTGAAAAGAATGGATCAGTGGCGGTGGGAGATAGTAACACAAAGCTAAGTGAGAAATTGAATTTGTCTGATGGAGGGAAGGTTCGATCCAAGAGGCAAGGGAGAAAGAAGGAAACGGTGGATTTGAGGACCCTTTTGGTTTTGTGTGCGCAAGCTGTGTCTGCCAGTGACAACAGGACTGCTAATGAACTGTTGAAGCAGATTAGGCAGCATTCTTCTGCTTTGGGTGATGCCTCACAGAGGTTGGCTCATTATGTGACCAATGCTCTTGAGGCTCGCTTGGTTGGTGATGGAACTGCCACCCAAATATTTTATATGAGCTACAAGAAGTTCACTACTACTGATTTCCTGAAAGCTTACCAAGTTTTCATATCTGCCTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAGATGATTATGAAAACAGCTGAAAAGGCAGAAACGCTTCATATTATTGATTTTGGTATCCTGTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAGTAGACCTGGAGGGCCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCCCAGCCTGGCTTTCGTCCTACTGAAAGAATTGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAAGGCCATAGCATCACGAAACTGGGAAACCATTCAAATTGAAGACCTTAAAATTGAGCGCAATGAGGTGCTTGCTGTGAACTGTCTGGTAAGGTTTAAGAATTTGCTTGATGAGTCAATTGAAGTGAACAGTCCCAGAAATGCTGTTCTGAATTTAATCAGGAAGATGAAACCAGATATTTTTGTTCACTGCGTAGTAAATGGATCTTATAATGCCCCTTTCTTTGTCACACGCTTCAGGGAGGCACTGTTCCATTATTCTTCAATTTATGATATGTTTGATACTCTCATATCCCGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAATTTTTGGGTCGGGAGATAATGAATGTTGTAGCATGTGAAGCTCTTGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCACGCTAGGATTACTAGAGCTGGTTTTAGGCAGCTCCCATTGGATAAGGAGATAATGACCAAATTTAGGGGCAAATTAAGGGAATGGTACCACAGGGATTTTGTCTTTGATGAAGATGGCGGCTGGATGCTTCAAGGTTGGAAGGGTCGCATTTTGTACGCTTCAACTTGTTGGGTGCCAGCATAA 1899 0.4334 MCYDPLSLQHTEKSFSEALELEPSLPLSPNQHPLESPDGNSSNSTSDSANSHDLKPSSPNTPVSGGGGGDVLHSSSHTPSLVVPPHALTKINDGTVDLDFSVTKLLAENIFSDADSMLQFKRGLEEASKFLPQRPQLFTGLESTSVSAEPKGRVVAVKMENSIGVKSRKNHARQDEEEERSNKQSAVSAVCAEEESEISEIFDKVLLSVENVPLCAEKNGSVAVGDSNTKLSEKLNLSDGGKVRSKRQGRKKETVDLRTLLVLCAQAVSASDNRTANELLKQIRQHSSALGDASQRLAHYVTNALEARLVGDGTATQIFYMSYKKFTTTDFLKAYQVFISACPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLSSRPGGPPKLRITGIEYPQPGFRPTERIEETGRRLAKYCKRFNVPFEYKAIASRNWETIQIEDLKIERNEVLAVNCLVRFKNLLDESIEVNSPRNAVLNLIRKMKPDIFVHCVVNGSYNAPFFVTRFREALFHYSSIYDMFDTLISRENEWRLMLEREFLGREIMNVVACEALERVERPETYKQWHARITRAGFRQLPLDKEIMTKFRGKLREWYHRDFVFDEDGGWMLQGWKGRILYASTCWVPA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03998 632 MobiDBLite consensus disorder prediction 14 84 - -
Pumo4g03998 632 MobiDBLite consensus disorder prediction 29 64 - -
Pumo4g03998 632 Pfam GRAS domain family 257 629 IPR005202 -
Pumo4g03998 632 ProSiteProfiles GRAS family profile. 248 630 IPR005202 -
Pumo4g03998 632 MobiDBLite consensus disorder prediction 165 188 - -
Pumo4g03998 632 MobiDBLite consensus disorder prediction 165 183 - -
Pumo4g03998 632 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 625 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03998 Pumo-Chr4 80636407 80638305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03998 1 632 GRAS Transcription Factor Family AT1G07530 49.488 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g03998 GRAS 2.7e-117 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03998 - - aprc:113855970 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03998 4 80636407 80638305 Pumo4g03998 4 80636407 80638305 ECH