Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03985 ATGGGAAAGGACTTGGTTTCTTCCGACCAGACCACTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTCAAATTCTTGATTATCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAGACATGCCACATATAAGAGAAAAACCATTTTGTATAACCAACAAGAAGACCAACAACATGGAATTACAGAAGCAGAACCCCTCCTGGTCGGGCAACATAGCGAAAAATTGCATGCTGCAGGCAAAAGTTCTCCCAAAAATCGCAAGAAGGAACCACGCACTGAGAAAAAGTTTAACAACGAAAACTCGAAAGGCAGTAGTACCATGGACTACTCAAGGAAAAACCAAGCCAGTAGTGAGTATGCACTTCATCTGGAGAAAGATGGCAAGACAACAGAAGATTCCCTTAACCACAAGCCTATGGAGACAAACAAGCATAACAGAGACATTTCCAATAAATTTGAGAAACATACTGATGTTTTTGAGTTACTTAGAGTGGAGAAGGATTTATTACTCAAATTTCTACGAGACATAGCCTTTGGTGGGAAAAAGGTCCAACAAGCTTCCCACATCAATGCAAGATTGACAAAATCTGGATCATTTCCTTTAGCTTCAACTTCACAGATGAAAAACATTAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCCTTTCCGAAGGGAGAAAAGTTGCATGCTGGTACTCAAGAATCAAACATGTTGGTGTCCAGTTTTGTGAAAGATGTTTCTTATGAGAAGCCAATGCCTTTAGTGAGTGATCTTGGTGTGGATAGTGCCATGAAACAAAAGGCAATCATTTCTTCAAGGCCTTCTCAGGGATCAAGTCACAAAGGGTGGAATCAAGTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAAAATATGCTCTTGTGGAATTCAGAAAAAGCAGTCACGAAACTACTTCTGCTGAAGCAATCCACCATAGAGCTTCACCTGAATATAGCATCATCAAAAATGAGGAAGAGATCTCACAAAGCTTAGAAGATGGTGTTGTTCAGCAATACAAAAGGAGTAAAAGCTCAAATGAAACTAGAGCTTCTGATTATGATTCCAACAAACATGATGCTCGCCTCATGCGAAGAACATCCTCTCTGAATGAATCGTTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCAAAGATGCCAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAACGAGGATAAGATCCACAAGAATGGGCATGCTCCTAGGTTTACAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTCTACACGATGCACTTTTTGATACAAATGATATAGGGAATACAGTTGAAGCTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTAAAGATAGACAAGTCACTTGATCATTTTAAAGAGGCTGAAATTGTGGAAACAGTACATGGGAGTGGCAGAGATGTAAATCCCAGTCTTTTATCAGATAAGATTATGGAGAAAATTGATGAAATTGATGAAGGAGTTACCTGTGACCAGATGGAGGACATGCATGAGCCAGCAGTGGAAGATGGAAGTTTTCCCCAAGAAAAAGAGGAAATGAGTAATGTGACTACATATCTTAGCATGGAGGTGATGGAAACTCTTGAAACTAGCTTCGAGGGCAATAAAACCAGCCATGCAGAAGGTACAGAATTGAATTCACTAGGCTCTACATTGGACGAATTGGAGACTGATTTATCATATAAAGGAAATGTATATCATTCTTTGCCAGACTCTTCATCCGACAGAAATGCTAGTGTGACAGCTGAAGACACAGGCAACACTTCCAATTTCAAATATGTGAAAAATGTTCTTGAAATTTCGGGCTTCTTGGGAAATGAGCACACTCAGATGCGATACACAGTAGACCAGCCACTAAAGCCCTCCATATTCAAAGATTTGGATGCGACTTTGAGCCAAGAAATTGAACCGTCTGAAGAAGAGACAATCAACTCTTACGATCACCAGCTTCTTTTTAACTTAGTTAACGAGGTGCTACTTGAAATTTATGGAAGGTCTCCAACTTACTTCCCAAGATCATTCTCCTTCAACCCCCACCTCCATCCAATGCCCAAGGGCACTATCTTCTGA 2181 0.3984 MGKDLVSSDQTTVQIQDNNPGCMWGMLQILDYHRWRVKKVFPHKRRRHATYKRKTILYNQQEDQQHGITEAEPLLVGQHSEKLHAAGKSSPKNRKKEPRTEKKFNNENSKGSSTMDYSRKNQASSEYALHLEKDGKTTEDSLNHKPMETNKHNRDISNKFEKHTDVFELLRVEKDLLLKFLRDIAFGGKKVQQASHINARLTKSGSFPLASTSQMKNISSRSLKHKQNEIWAFPKGEKLHAGTQESNMLVSSFVKDVSYEKPMPLVSDLGVDSAMKQKAIISSRPSQGSSHKGWNQVVLHQFKVIKQKIKYALVEFRKSSHETTSAEAIHHRASPEYSIIKNEEEISQSLEDGVVQQYKRSKSSNETRASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSKDAKWQSSKSKSLKLTNEDKIHKNGHAPRFTRSNLSMPNLETLGFILHDALFDTNDIGNTVEAYNRVHRKSVSLPLKIDKSLDHFKEAEIVETVHGSGRDVNPSLLSDKIMEKIDEIDEGVTCDQMEDMHEPAVEDGSFPQEKEEMSNVTTYLSMEVMETLETSFEGNKTSHAEGTELNSLGSTLDELETDLSYKGNVYHSLPDSSSDRNASVTAEDTGNTSNFKYVKNVLEISGFLGNEHTQMRYTVDQPLKPSIFKDLDATLSQEIEPSEEETINSYDHQLLFNLVNEVLLEIYGRSPTYFPRSFSFNPHLHPMPKGTIF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03985 726 MobiDBLite consensus disorder prediction 85 106 - -
Pumo4g03985 726 MobiDBLite consensus disorder prediction 83 152 - -
Pumo4g03985 726 MobiDBLite consensus disorder prediction 126 152 - -
Pumo4g03985 726 PANTHER PROTEIN TRM32 1 723 IPR044257 -
Pumo4g03985 726 MobiDBLite consensus disorder prediction 354 379 - -
Pumo4g03985 726 MobiDBLite consensus disorder prediction 107 125 - -
Pumo4g03985 726 Pfam Domain of unknown function (DUF4378) 628 711 IPR025486 -
Pumo4g03985 726 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03985 Pumo-Chr4 80478753 80484134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03985 621 723 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 39.815 3.46e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03985 - - gmx:100784103 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03985 4 80478753 80484134 Pumo4g03985 4 80478753 80484134 ECH