Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03941 ATGGACGAAAACATTGAAACCGCTCGCGAAATCATTTCTAAATGGGATTCTATTTCCCCTTCTGACCAAACCGCTCCTCTTTTCAGCAACACACGCCAGGAAGCCAAACAGTACCTTAACGCGGTCATGAGCCTGCAGTCCACTATGCAGCACCTCGTCGCACTGGATTCCTCCTCCGACAGCCTTATTCAAGCCCAATTCCTAATGCAACGCGCCATGAAGAGGCTTCAGACGGAATTCTATCGGATATTAGCCGAAAACAGAGACAATCTCGATCCTGAATCCGTCACCTCCACCGATCACCGCAGCAGCAGCGTCTCCGACGACGGCACCGATTTCTCTGACGACGAGTTCCGCTTCGCCGGCGACTCGGTCTCCACGGTCGCCATGGCGGACTTGAAAGCCATTGCGGAGTGTATGGTTTCCAACGGCTACAGCAAAGAGTGCGTCAAGATTTACATCTTAATGAGAAAGTCCATAGTGGATGAGTCACTGTACCATTTCGGAGTGGAGAGGCTCAGTTTCTCTCAGGTTCAGAAGATGGACTGGGAGACGCTCGAGTCAAAGATTAAGTGCTGGCTCAACGCCGTCAAGATCGCCGTCGGCACTCTGTTTCAAGGCGAGAGAACGCTCTGCGATTACGTCTTCGGTTCGCGGGAGAGGAACATCGCGGAGTCATGTTTCGCCGCGATTTGCAGAGAAGGCGCGGCGTCGCTGTTCAGATTCCCGGAGATCGTGGCAAAGTGCAAGAAAACGCCGGAGAAAATGTTCAGGACACTTGACTTGTACGAAGCTATCTCTGAAAACCGGCAAAAAATTGAATCCATCTTCTCGTCGGAATCAACATCCTCCATCAGATCGCAGGTACTTGCTTCTCAGGCGAGGCTCGGCGAGGCCGTTCGGACGATGTTAATCAACTTCGAATCGGCGATTCAGAAGGAATCTTCCAAGATTCCCGTGCCTGACGGCGGGATCCATCCGCTCACGCGCTACGTCATGAACTACATCGTGTTCCTCGCCGATTACGGGGACGCGCTAGCGGAGATAGTAGCCGATTGTCCGCAAAATCCGTTGCCGGAGTCTTACTACCGCAGTCCGGATCGTGAGGGAAAGAATCGGTCGTCGGAGATAGCTGAACGGATCGCGTGGCTGATACTAGTGCTCCTTTGCAAGCTCGACGGCAAAGCGGAACTCTACAAGGAGGTTGCACTCTCTTACCTATTCCTGGCGAATAACATGCAATACGTCGTCGTAAAGGTCCAAAACTCAAACCTAGGGTTCATCCTCGGGGAGGATTGGTTCACGAAACAGGAATTGAAGGTGAAAGAGTACGTTTCCAAGTACGAGCGCGTTGCTCGGAGATGA 1365 0.5238 MDENIETAREIISKWDSISPSDQTAPLFSNTRQEAKQYLNAVMSLQSTMQHLVALDSSSDSLIQAQFLMQRAMKRLQTEFYRILAENRDNLDPESVTSTDHRSSSVSDDGTDFSDDEFRFAGDSVSTVAMADLKAIAECMVSNGYSKECVKIYILMRKSIVDESLYHFGVERLSFSQVQKMDWETLESKIKCWLNAVKIAVGTLFQGERTLCDYVFGSRERNIAESCFAAICREGAASLFRFPEIVAKCKKTPEKMFRTLDLYEAISENRQKIESIFSSESTSSIRSQVLASQARLGEAVRTMLINFESAIQKESSKIPVPDGGIHPLTRYVMNYIVFLADYGDALAEIVADCPQNPLPESYYRSPDREGKNRSSEIAERIAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVQNSNLGFILGEDWFTKQELKVKEYVSKYERVARR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03941 454 Gene3D Exocyst complex component Exo70 10 453 - -
Pumo4g03941 454 SUPERFAMILY Cullin repeat-like 27 450 IPR016159 -
Pumo4g03941 454 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 451 IPR004140 GO:0000145|GO:0006887
Pumo4g03941 454 Pfam Exo70 exocyst complex subunit 192 451 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03941 Pumo-Chr4 80033937 80035385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03941 4 452 EXO70 exocyst subunit family AT5G59730 53.404 4.89e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03941 K07195 - gmx:100801773 785.793